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Report for CCDS81378.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
81378.1 |
Public |
Homo sapiens |
1 |
OAZ3 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:51686](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:81378.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:51686](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 1 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85
Review status: Reviewed (by RefSeq and Havana)
Attributes |
Non-AUG initiation codon |
Ribosomal slippage (translational frameshift) |
Sequence IDs included in CCDS 81378.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
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![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000400999.7 |
ENSP00000383784.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000400999.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000383784.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000400999](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000383784](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_016178.2 |
NP_057262.2 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_016178.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_057262.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_016178](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_057262](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_057262.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_057262.2 |
235 |
Q9UMX2-1 |
235 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 81378.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. This works on the replacement symbol in the Translation Exceptions section also. |
Translation Exceptions: replace the symbol L (codon CTG) with M at amino acid position 1
Nucleotide Sequence (708 nt): CTGCCTTGTAAGAGGTGTCGCCCCTCTGTCTACTCCCTTTCTTATATCAAGAGGGGAAAAACACGTAACT ACCTCTACCCGATCTGGTCACCATACGCCTATTACCTTTACTGTTACAAGTACCGGATCACTCTCCGGGA GAAGATGCTGCCTCGTTGTTATAAAAGCATCACTTATAAGGAAGAGGAGGACTTGACACTCCAGCCCCGT TCCTGCCTCCAGTGCTCCGAGTCCCTAGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACG ACCAGCTTAAAGAACTGTATTCGGCTGGGAACTTGACGGTGCTGGCTACTGACCCCCTGCTCCACCAGGA CCCAGTACAGTTAGACTTTCACTTCCGCCTTACCTCCCAGACCTCTGCCCATTGGCACGGCCTTCTCTGT GACCGTCGACTCTTCCTGGATATCCCATATCAGGCCTTGGATCAAGGCAACCGGGAAAGTTTGACTGCAA CCCTGGAGTACGTGGAAGAGAAGACAAATGTGGACTCTGTGTTTGTGAACTTCCAGAATGATCGGAACGA CAGAGGTGCCCTGCTGCGGGCCTTCAGCTACATGGGCTTTGAGGTGGTCAGACCAGATCACCCTGCCCTC CCTCCCTTGGACAATGTCATCTTTATGGTGTATCCCCTTGAAAGGGATGTTGGCCACCTGCCCAGTGAGC CTCCTTGA
Translation (235 aa): MPCKRCRPSVYSLSYIKRGKTRNYLYPIWSPYAYYLYCYKYRITLREKMLPRCYKSITYKEEEDLTLQPR SCLQCSESLVGLQEGKSTEQGNHDQLKELYSAGNLTVLATDPLLHQDPVQLDFHFRLTSQTSAHWHGLLC DRRLFLDIPYQALDQGNRESLTATLEYVEEKTNVDSVFVNFQNDRNDRGALLRAFSYMGFEVVRPDHPAL PPLDNVIFMVYPLERDVGHLPSEPP
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