NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS81518.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81518.1 Public Homo sapiens 10 ACADSB 24 110 108 CCDS HistoryNCBI Gene:36Re-query CCDS DB by CCDS ID:81518.1Re-query CCDS DB by GeneID:36See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81518.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368869.8 ENSP00000357862.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000368869.8Link to Ensembl Protein Viewer:ENSP00000357862.4Re-query CCDS DB by Nucleotide ID:ENST00000368869Re-query CCDS DB by Protein ID:ENSP00000357862
Original member Current member NCBI NM_001330174.3 NP_001317103.1 Accepted alive Link to Nucleotide Sequence:NM_001330174.3Link to Protein Sequence:NP_001317103.1Re-query CCDS DB by Nucleotide ID:NM_001330174Re-query CCDS DB by Protein ID:NP_001317103Link to BLAST:NP_001317103.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317103.1 330 P45954-2 330 100% 0 0

Chromosomal Locations for CCDS 81518.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 123040469 123040672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123041209 123041379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123043046 123043171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123044393 123044485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123047209 123047298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123051049 123051186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123053061 123053160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123053695 123053765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (993 nt):
ATGGGTATTGAAGTTGACCCAGAATATGGAGGCACAGGAGCTTCATTTTTATCCACTGTGCTCGTGATAG
AGGAATTAGCCAAAGTTGATGCATCTGTGGCTGTCTTTTGTGAGATCCAGAACACATTAATTAACACACT
GATTAGAAAACATGGAACAGAAGAACAAAAGGCCACCTATTTGCCTCAGCTCACTACAGAAAAAGTAGGA
AGTTTCTGCCTTTCAGAGGCTGGAGCAGGTAGTGACTCATTTGCTTTGAAGACCAGAGCTGATAAAGAGG
GAGATTATTATGTCCTCAATGGATCAAAGATGTGGATCAGCAGTGCTGAGCACGCAGGGCTCTTTCTGGT
GATGGCAAATGTAGACCCTACCATTGGATATAAGGGAATTACCTCCTTCTTAGTAGATCGTGATACTCCG
GGCCTTCATATAGGGAAACCTGAAAACAAATTGGGGCTCAGAGCTTCTTCCACCTGCCCGTTAACATTCG
AAAATGTCAAGGTTCCAGAAGCCAATATCTTGGGACAAATTGGACATGGCTATAAGTATGCCATAGGGAG
TCTCAATGAAGGTAGAATAGGAATTGCTGCACAGATGCTGGGACTGGCGCAAGGATGTTTTGACTACACT
ATTCCATATATTAAAGAAAGGATACAATTTGGCAAAAGACTATTTGATTTTCAGGGCCTCCAACACCAAG
TGGCTCACGTGGCCACCCAGCTGGAAGCTGCAAGATTACTAACATACAATGCTGCTAGGCTTTTAGAAGC
TGGAAAGCCATTCATAAAAGAAGCGTCAATGGCCAAATACTATGCATCAGAGATTGCAGGACAAACAACG
AGTAAATGTATCGAGTGGATGGGGGGAGTAGGCTACACCAAAGATTACCCTGTGGAGAAATACTTCCGAG
ATGCAAAGATTGGTACGATATATGAAGGAGCTTCCAACATCCAGTTGAACACCATTGCAAAGCATATCGA
TGCAGAATACTGA

Translation (330 aa):
MGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEKVG
SFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFLVDRDTP
GLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYT
IPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEASMAKYYASEIAGQTT
SKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQLNTIAKHIDAEY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH