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Report for CCDS81576.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81576.1 Public Homo sapiens 11 MTA2 24 110 108 CCDS HistoryNCBI Gene:9219Re-query CCDS DB by CCDS ID:81576.1Re-query CCDS DB by GeneID:9219See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81576.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000524902.5 ENSP00000431346.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000524902.5Link to Ensembl Protein Viewer:ENSP00000431346.1Re-query CCDS DB by Nucleotide ID:ENST00000524902Re-query CCDS DB by Protein ID:ENSP00000431346
Original member Current member EBI ENST00000527204.5 ENSP00000431797.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000527204.5Link to Ensembl Protein Viewer:ENSP00000431797.1Re-query CCDS DB by Nucleotide ID:ENST00000527204Re-query CCDS DB by Protein ID:ENSP00000431797
Original member Current member NCBI NM_001330292.2 NP_001317221.1 Accepted alive Link to Nucleotide Sequence:NM_001330292.2Link to Protein Sequence:NP_001317221.1Re-query CCDS DB by Nucleotide ID:NM_001330292Re-query CCDS DB by Protein ID:NP_001317221Link to BLAST:NP_001317221.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317221.1 495 O94776-2 495 100% 0 0

Chromosomal Locations for CCDS 81576.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 62593875 62594040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62594259 62594407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62594516 62594634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62594981 62595070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62595264 62595492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62595752 62595891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62596010 62596107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62596279 62596337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62596458 62596532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62596637 62596825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62597316 62597415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62597610 62597683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1488 nt):
ATGGAGATGAAGGTCTGGGACCCAGACAACCCTCTCACAGACCGGCAGATCGACCAGTTTCTTGTGGTGG
CCCGAGCTGTGGGAACCTTTGCAAGAGCCCTAGATTGTAGCAGCTCCATTCGGCAGCCAAGCTTGCACAT
GAGTGCAGCTGCTGCCTCCCGAGATATCACTCTGTTTCACGCCATGGATACCTTGCAAAGGAACGGCTAC
GACCTGGCTAAGGCCATGTCGACCCTGGTACCCCAGGGAGGCCCGGTGCTGTGTCGGGATGAGATGGAGG
AATGGTCAGCCTCAGAGGCCATGCTATTTGAGGAGGCCCTAGAGAAGTATGGGAAGGACTTCAATGATAT
TCGCCAGGATTTTCTACCCTGGAAGTCACTTGCCAGCATAGTCCAGTTTTATTACATGTGGAAAACCACA
GACCGGTATATTCAGCAGAAAAGGTTGAAAGCTGCTGAAGCAGACAGCAAACTGAAACAGGTCTACATTC
CCACCTACACTAAGCCAAACCCTAACCAGATCATTTCTGTGGGTTCAAAACCTGGCATGAATGGGGCTGG
ATTTCAGAAGGGCCTGACTTGTGAGAGTTGCCACACCACACAGTCTGCTCAGTGGTATGCCTGGGGCCCA
CCTAACATGCAGTGCCGCCTCTGTGCTTCCTGTTGGATCTACTGGAAGAAGTATGGGGGACTGAAGACCC
CAACTCAGCTTGAGGGGGCCACTCGGGGCACCACGGAGCCACACTCAAGGGGTCATTTATCCAGACCTGA
AGCTCAAAGTCTCTCTCCTTACACAACCAGCGCCAACAGGGCCAAGCTACTGGCTAAGAACAGACAAACT
TTCCTGCTTCAGACCACAAAGCTGACCCGTCTTGCCAGACGCATGTGCAGGGACCTATTACAGCCAAGGA
GGGCCGCCCGACGGCCTTATGCTCCTATCAATGCCAATGCCATCAAAGCAGAGTGCTCCATTCGACTTCC
TAAGGCCGCCAAGACTCCATTGAAGATTCACCCTCTGGTGCGGCTGCCCCTGGCAACTATCGTCAAAGAT
CTGGTGGCCCAGGCACCCCTGAAACCAAAAACACCTCGGGGTACCAAGACACCGATCAACAGAAACCAGC
TGTCCCAGAACCGGGGACTGGGGGGCATTATGGTGAAACGGGCCTATGAGACTATGGCAGGGGCAGGGGT
TCCTTTCTCTGCCAATGGAAGGCCTCTGGCTTCAGGGATTCGTTCAAGCTCACAGCCAGCAGCCAAGCGT
CAGAAACTAAACCCAGCTGATGCCCCCAATCCTGTGGTGTTTGTGGCCACAAAGGATACCAGGGCCCTAC
GGAAGGCTCTGACCCATCTGGAAATGCGGCGAGCTGCTCGCCGACCCAACTTGCCCCTGAAGGTGAAGCC
AACGCTGATTGCAGTGCGGCCCCCTGTCCCTCTACCTGCACCCTCACATCCTGCCAGCACCAATGAGCCT
ATTGTCCTGGAGGACTGA

Translation (495 aa):
MEMKVWDPDNPLTDRQIDQFLVVARAVGTFARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGY
DLAKAMSTLVPQGGPVLCRDEMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTT
DRYIQQKRLKAAEADSKLKQVYIPTYTKPNPNQIISVGSKPGMNGAGFQKGLTCESCHTTQSAQWYAWGP
PNMQCRLCASCWIYWKKYGGLKTPTQLEGATRGTTEPHSRGHLSRPEAQSLSPYTTSANRAKLLAKNRQT
FLLQTTKLTRLARRMCRDLLQPRRAARRPYAPINANAIKAECSIRLPKAAKTPLKIHPLVRLPLATIVKD
LVAQAPLKPKTPRGTKTPINRNQLSQNRGLGGIMVKRAYETMAGAGVPFSANGRPLASGIRSSSQPAAKR
QKLNPADAPNPVVFVATKDTRALRKALTHLEMRRAARRPNLPLKVKPTLIAVRPPVPLPAPSHPASTNEP
IVLED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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