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Report for CCDS81625.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81625.1 Public Homo sapiens 11 CFAP68 24 110 108 CCDS HistoryNCBI Gene:64776Re-query CCDS DB by CCDS ID:81625.1Re-query CCDS DB by GeneID:64776See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81625.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000530214.5 ENSP00000435864.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000530214.5Link to Ensembl Protein Viewer:ENSP00000435864.1Re-query CCDS DB by Nucleotide ID:ENST00000530214Re-query CCDS DB by Protein ID:ENSP00000435864
Original member Current member NCBI NM_001330371.2 NP_001317300.1 Accepted alive Link to Nucleotide Sequence:NM_001330371.2Link to Protein Sequence:NP_001317300.1Re-query CCDS DB by Nucleotide ID:NM_001330371Re-query CCDS DB by Protein ID:NP_001317300Link to BLAST:NP_001317300.1

Chromosomal Locations for CCDS 81625.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 111879561 111879605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111882368 111882598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111883771 111883860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (366 nt):
ATGGCTGCCTCCCAGTGTCTCTGCTGCTCAAAATTTCTCTTCCAGAGACAGAACCTCGCCTGTTTCCTCA
CAAACCCACACTGTGGCAGCCTTGTTAATGCAGATGGCCATGGTGAAGTGTGGACAGATTGGAATAATAT
GTCCAAGTTTTTCCAGTATGGATGGCGATGCACCACTAATGAGAATACCTATTCAAACCGTACCCTGATG
GGCAACTGGAACCAGGAAAGATATGACCTGAGGAATATCGTGCAGCCCAAACCCTTGCCTTCCCAGGATT
TAAGCGAGAGCCTCACTGGTTCCCAGGACATCAACCTGAACTGGATCCTCCCCGATACAAATGCACAGAA
AAGTCAACTTACATGA

Translation (121 aa):
MAASQCLCCSKFLFQRQNLACFLTNPHCGSLVNADGHGEVWTDWNNMSKFFQYGWRCTTNENTYSNRTLM
GNWNQERYDLRNIVQPKPLPSQDLSESLTGSQDINLNWILPDTNAQKSQLT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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