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Report for CCDS82013.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82013.1 Public Homo sapiens 16 ZFP1 24 110 108 CCDS HistoryNCBI Gene:162239Re-query CCDS DB by CCDS ID:82013.1Re-query CCDS DB by GeneID:162239See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82013.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000332307.4 ENSP00000333192.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000332307.4Link to Ensembl Protein Viewer:ENSP00000333192.4Re-query CCDS DB by Nucleotide ID:ENST00000332307Re-query CCDS DB by Protein ID:ENSP00000333192
Original member Current member NCBI NM_001318471.2 NP_001305400.1 Accepted alive Link to Nucleotide Sequence:NM_001318471.2Link to Protein Sequence:NP_001305400.1Re-query CCDS DB by Nucleotide ID:NM_001318471Re-query CCDS DB by Protein ID:NP_001305400Link to BLAST:NP_001305400.1
Original member Current member NCBI NM_001318472.2 NP_001305401.1 Accepted alive Link to Nucleotide Sequence:NM_001318472.2Link to Protein Sequence:NP_001305401.1Re-query CCDS DB by Nucleotide ID:NM_001318472Re-query CCDS DB by Protein ID:NP_001305401Link to BLAST:NP_001305401.1

Chromosomal Locations for CCDS 82013.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 75166854 75166896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 75169253 75170334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1125 nt):
ATGGATGTGATGCTGGAGAATTATAGCAACTTACTTTCAGTGGAAGTGTGGAAGGCTGATGACCAGATGG
AGAGAGACCACAGAAACCCAGACGAGCAGGCGAGGCAATTTTTAATTCTTAAGAACCAAACCCCAATTGA
GGAAAGAGGCGATCTCTTTGGAAAAGCACTTAATCTGAACACAGACTTTGTTTCTTTAAGACAAGTACCT
TATAAATATGACTTATATGAAAAAACTTTGAAATATAATTCAGACTTGCTTAATAGTAATAGAAGCTATG
CAGGAAAGCAGACTGATGAGTGTAATGAATTTGGAAAAGCACTTCTCTACCTGAAGCAAGAGAAAACCCA
CAGTGGAGTAGAATATTCTGAATACAATAAAAGTGGAAAAGCCCTCAGCCATAAAGCAGCCATTTTTAAA
CATCAGAAAATAAAAAACTTGGTTCAACCTTTCATTTGTACTTACTGTGACAAGGCTTTCTCCTTTAAGT
CACTCCTCATTAGTCATAAGAGAATACATACTGGAGAAAAGCCATATGAATGCAATGTATGTAAGAAAAC
CTTCTCCCATAAGGCCAACCTCATCAAACATCAGAGAATTCACACTGGGGAGAAACCTTTCGAGTGTCCG
GAATGTGGAAAAGCTTTCACCCACCAGTCAAACCTCATTGTACACCAGAGAGCACATATGGAGAAGAAGC
CCTATGAGTGCAGTGAATGTGGAAAGACATTTGCCCAAAAGTTTGAACTCACCACACACCAGAGAATTCA
TACAGGAGAGCGACCCTATGAGTGTAACGAATGTGCAAAAACCTTCTTTAAGAAGTCAAACCTTATCATA
CATCAGAAGATTCACACGGGGGAGAAACGCTATGAGTGCAGTGAATGTGGAAAATCCTTTATCCAGAACT
CACAGCTCATCATACACATGAGAACTCATACAGGAGAGAAACCCTATGAATGTACTGAGTGCGGCAAAAC
TTTCAGCCAGAGGTCAACTCTTAGATTACACTTGCGAATCCACACAGGAGAGAAACCATATGAGTGTTCC
GAATGTGGGAAGGCCTTTAGCAGGAAGTCCCGACTCAGTGTCCATCAGAGAGTTCACATCGGGGAGAAAC
CCTGA

Translation (374 aa):
MDVMLENYSNLLSVEVWKADDQMERDHRNPDEQARQFLILKNQTPIEERGDLFGKALNLNTDFVSLRQVP
YKYDLYEKTLKYNSDLLNSNRSYAGKQTDECNEFGKALLYLKQEKTHSGVEYSEYNKSGKALSHKAAIFK
HQKIKNLVQPFICTYCDKAFSFKSLLISHKRIHTGEKPYECNVCKKTFSHKANLIKHQRIHTGEKPFECP
ECGKAFTHQSNLIVHQRAHMEKKPYECSECGKTFAQKFELTTHQRIHTGERPYECNECAKTFFKKSNLII
HQKIHTGEKRYECSECGKSFIQNSQLIIHMRTHTGEKPYECTECGKTFSQRSTLRLHLRIHTGEKPYECS
ECGKAFSRKSRLSVHQRVHIGEKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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