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Report for CCDS82075.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82075.1 Public Homo sapiens 17 TMEM220 24 110 108 CCDS HistoryNCBI Gene:388335Re-query CCDS DB by CCDS ID:82075.1Re-query CCDS DB by GeneID:388335See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82075.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000455996.6 ENSP00000396973.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000455996.6Link to Ensembl Protein Viewer:ENSP00000396973.2Re-query CCDS DB by Nucleotide ID:ENST00000455996Re-query CCDS DB by Protein ID:ENSP00000396973
Original member Current member NCBI NM_001330139.3 NP_001317068.1 Accepted alive Link to Nucleotide Sequence:NM_001330139.3Link to Protein Sequence:NP_001317068.1Re-query CCDS DB by Nucleotide ID:NM_001330139Re-query CCDS DB by Protein ID:NP_001317068Link to BLAST:NP_001317068.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317068.1 150 Q6QAJ8-2 150 100% 0 0

Chromosomal Locations for CCDS 82075.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 10715453 10715588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 10723270 10723329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 10725011 10725134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 10726204 10726264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 10729780 10729851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (453 nt):
ATGGCGCCAGCGCTGTGGCGGGCCTGCAACGGACTCATGGCCGCCTTCTTCGCGCTGGCGGCCTTGGTGC
AGGTGGTGTACACAATCCCTGCAGTACTGACCCTGCTTGTTGGACTTAACCCTGAAGTCACAGGTAATGT
TATTTGGAAAAGTATCTCTGCAATACACATACTCTTTTGTACGGTGTGGGCTGTTGGCTTGGCGTCCTAC
CTCTTGCATCGTACACAACAGAACATCTTACATGAGGAAGAAGGCAGGGAGCTGTCTGGTCTGGTGATTA
TTACAGCATGGATTATCCTGTGCCACAGTTCCTCAAAGAATCCAGTTGGTGGAAGAATTCAATTGGCTAT
TGCCATTGTAATCACACTTTTCCCATTTATCTCATGGGTCTACATATATATTAACAAGGAAATGCGGTCC
TCTTGGCCAACTCACTGCAAGACAGTAATTTAA

Translation (150 aa):
MAPALWRACNGLMAAFFALAALVQVVYTIPAVLTLLVGLNPEVTGNVIWKSISAIHILFCTVWAVGLASY
LLHRTQQNILHEEEGRELSGLVIITAWIILCHSSSKNPVGGRIQLAIAIVITLFPFISWVYIYINKEMRS
SWPTHCKTVI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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