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Report for CCDS82196.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82196.1 Public Homo sapiens 17 CD300A 24 110 108 CCDS HistoryNCBI Gene:11314Re-query CCDS DB by CCDS ID:82196.1Re-query CCDS DB by GeneID:11314See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82196.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000392625.7 ENSP00000376401.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392625.7Link to Ensembl Protein Viewer:ENSP00000376401.3Re-query CCDS DB by Nucleotide ID:ENST00000392625Re-query CCDS DB by Protein ID:ENSP00000376401
Original member Current member NCBI NM_001330457.2 NP_001317386.1 Accepted alive Link to Nucleotide Sequence:NM_001330457.2Link to Protein Sequence:NP_001317386.1Re-query CCDS DB by Nucleotide ID:NM_001330457Re-query CCDS DB by Protein ID:NP_001317386Link to BLAST:NP_001317386.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317386.1 150 Q9UGN4-4 150 100% 0 0

Chromosomal Locations for CCDS 82196.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 74466704 74466743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74474532 74474685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74477436 74477530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74481289 74481326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74484001 74484126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (453 nt):
ATGTGGCTGCCTTGGGCTCTGTTGCTTCTCTGGGTCCCAGCATCAACGTCAATGACACCTGCAAGTATCA
CTGCGGCCAAGACCTCAACAATCACAACTGCATTTCCACCTGTATCATCCACTACCCTGTTTGCAGTGGG
TGCCACCCACAGTGCCAGCATCCAGGAGGAAACTGAGGAGGTGGTGAACTCACAGCTCCCGCTGCTCCTC
TCCCTGCTGGCATTGTTGCTGCTTCTGTTGGTGGGGGCCTCCCTGCTAGCCTGGAGGATGTTTCAGAAAT
GGATCAAAGCTGGTGACCATTCAGAGCTGTCCCAGAACCCCAAGCAGGCCTCCCCCAGGGAAGAACTTCA
CTATGCCTCGGTGGTGTTTGATTCTAACACCAACAGGATAGCTGCTCAGAGGCCTCGGGAGGAGGAACCA
GATTCAGATTACAGTGTGATAAGGAAGACATAG

Translation (150 aa):
MWLPWALLLLWVPASTSMTPASITAAKTSTITTAFPPVSSTTLFAVGATHSASIQEETEEVVNSQLPLLL
SLLALLLLLLVGASLLAWRMFQKWIKAGDHSELSQNPKQASPREELHYASVVFDSNTNRIAAQRPREEEP
DSDYSVIRKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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