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Report for CCDS82197.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
82197.1 |
Public |
Homo sapiens |
17 |
CD300A |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:11314](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:82197.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:11314](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 17 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 82197.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000577511.1 |
ENSP00000463189.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000577511.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000463189.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000577511](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000463189](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000648095.1 |
ENSP00000497133.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000648095.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000497133.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000648095](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000497133](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001330456.1 |
NP_001317385.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001330456.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001317385.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001330456](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001317385](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001317385.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 82197.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (510 nt): ATGACACCTGCAAGTATCACTGCGGCCAAGACCTCAACAATCACAACTGCATTTCCACCTGTATCATCCA CTACCCTGTTTGCAGTGGGTGCCACCCACAGTGCCAGCATCCAGGAGGAAACTGAGGAGGTGGTGAACTC ACAGCTCCCGCTGCTCCTCTCCCTGCTGGCATTGTTGCTGCTTCTGTTGGTGGGGGCCTCCCTGCTAGCC TGGAGGATGTTTCAGAAATGGATCAAAGCTGGTGACCATTCAGAGCTGTCCCAGAACCCCAAGCAGGCTG CCACGCAGAGTGAGCTGCACTACGCAAATCTGGAGCTGCTGATGTGGCCTCTGCAGGAAAAGCCAGCACC ACCAAGGGAGGTGGAGGTGGAATACAGCACTGTGGCCTCCCCCAGGGAAGAACTTCACTATGCCTCGGTG GTGTTTGATTCTAACACCAACAGGATAGCTGCTCAGAGGCCTCGGGAGGAGGAACCAGATTCAGATTACA GTGTGATAAGGAAGACATAG
Translation (169 aa): MTPASITAAKTSTITTAFPPVSSTTLFAVGATHSASIQEETEEVVNSQLPLLLSLLALLLLLLVGASLLA WRMFQKWIKAGDHSELSQNPKQAATQSELHYANLELLMWPLQEKPAPPREVEVEYSTVASPREELHYASV VFDSNTNRIAAQRPREEEPDSDYSVIRKT
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