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Report for CCDS82405.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82405.1 Public Homo sapiens 19 ZNF17 24 110 108 CCDS HistoryNCBI Gene:7565Re-query CCDS DB by CCDS ID:82405.1Re-query CCDS DB by GeneID:7565See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82405.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307658.12 ENSP00000302455.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000307658.12Link to Ensembl Protein Viewer:ENSP00000302455.7Re-query CCDS DB by Nucleotide ID:ENST00000307658Re-query CCDS DB by Protein ID:ENSP00000302455
Original member Current member NCBI NM_001330617.2 NP_001317546.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001330617.2Link to Protein Sequence:NP_001317546.1Re-query CCDS DB by Nucleotide ID:NM_001330617Re-query CCDS DB by Protein ID:NP_001317546Link to BLAST:NP_001317546.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317546.1 664 P17021-2 664 100% 0 0

Chromosomal Locations for CCDS 82405.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 57413616 57413636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57417912 57418038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57419635 57421481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1995 nt):
ATGCTTATGGATGCTGGACAGGATTATATGGTTTTTGAGGACGTGGCCATACATTTCTCCCAGGAGGAGT
GGGGAATTCTTAATGACGTTCAGAGACACCTGCACAGCGATGTGATGCTGGAGAACTTTGCACTTTTGTC
CTCAGTAGGTTGTTGGCATGGAGCCAAGGATGAGGAGGCACCTTCCAAGCAATGTGTTTCTGTAGGAGTG
TCACAGGTCACAACTTTAAAGCCAGCTTTGTCCACCCAGAAGGCCCAGCCCTGTGAGACATGTAGCTCAC
TTCTGAAGGACATTCTACACCTGGCTGAGCATGACGGAACACACCCCAAGCGTACAGCCAAGCTTTACCT
GCACCAAAAGGAGCATCTTAGAGAGAAGCTCACCAGAAGTGATGAAGGGAGGCCTTCGTTTGTGAATGAC
AGTGTTCACCTGGCAAAGAGGAACCTCACATGCATGCAGGGTGGCAAGGATTTTACTGGTGATTCAGATC
TTCAACAACAGGCTCTTCACAGTGGGTGGAAGCCACACAGGGACACTCATGGTGTGGAGGCCTTTCAAAG
TGGACAGAATAATTACAGCTGCACCCAATGTGGGAAAGACTTTTGCCACCAACATACACTGTTTGAGCAC
CAGAAAATCCACACAGAGGAAAGGCCTTATGAGTGCAGTGAATGTGGCAAATTGTTTAGGTACAACTCCG
ACCTTATTAAACATCAGCGAAATCATACTGGAGAAAGGCCTTATAAGTGTAGTGAATGTGGAAAAGCCTT
CAGCCTCAAATACAATGTTGTTCAACACCAGAAAATTCACACTGGAGAAAGGCCTTATGAGTGCAGTGAA
TGTGGGAAAGCTTTTCTTAGAAAGTCTCACCTACTTCAGCACCAGAGGATTCACACCAGGCCAAGGCCTT
ATGTGTGTAGTGAATGTGGGAAGGCCTTCCTTACACAGGCTCACCTTGTTGGTCACCAGAAAATTCATAC
TGGAGAACGGCCTTATGGATGCAATGAATGTGGGAAATACTTTATGTACAGTTCAGCACTCATTAGACAT
CAGAAAGTTCACACTGGAGAAAGGCCTTTTTATTGCTGTGAATGTGGGAAATTCTTTATGGACAGCTGCA
CACTCATTATTCACCAGAGAGTTCATACTGGAGAAAAACCTTATGAATGCAACGAATGTGGGAAATTCTT
TAGATACCGTTCCACACTCATTAGACATCAGAAAGTTCACACTGGAGAAAAGCCTTATGAGTGTAGTGAA
TGTGGGAAGTTCTTTATGGACACTTCCACACTCATTATTCATCAGAGAGTTCATACTGGAGAAAAGCCTT
ATGAATGCAACAAATGTGGGAAATTCTTTAGGTATTGCTTCACACTGAATAGACATCAGAGAGTTCACTC
TGGAGAGAGGCCTTATGAATGCAGTGAATGTGGCAAATTCTTTGTGGACAGCTGTACACTGAAGAGTCAT
CAGAGAGTTCACACTGGAGAAAGACCTTTTGAATGCAGCATTTGTGGGAAATCCTTTAGATGTCGCTCCA
CACTTGATACACATCAGAGAATTCACACTGGTGAAAGGCCTTATGAGTGTAGTGAATGTGGGAAATTCTT
TAGGCACAACTCAAATCATATTAGACATCGGAGAAATCACTTTGGAGAAAGGTCTTTTGAGTGCACTGAG
TGTGGGAGAGTTTTTAGCCAAAATTCCCACCTCATTCGGCACCAAAAAGTTCACACTAGGGAAAGAACTT
ACAAATGCAGCAAATGTGGGAAATTTTTTATGGACAGCTCCACACTCATTAGTCATGAGAGAGTTCATAC
TGGAGAAAAGCCTTATGAGTGCAGTGAATGTGGGAAAGTCTTTAGATACAACTCCAGCCTCATTAAACAT
CGGAGAATTCACACTGGAGAGAGACCTTATCAGTGCAGTGAATGTGGAAGAGTCTTTAACCAAAATTCTC
ATCTCATTCAGCACCAGAAAGTTCACACCAGATAA

Translation (664 aa):
MLMDAGQDYMVFEDVAIHFSQEEWGILNDVQRHLHSDVMLENFALLSSVGCWHGAKDEEAPSKQCVSVGV
SQVTTLKPALSTQKAQPCETCSSLLKDILHLAEHDGTHPKRTAKLYLHQKEHLREKLTRSDEGRPSFVND
SVHLAKRNLTCMQGGKDFTGDSDLQQQALHSGWKPHRDTHGVEAFQSGQNNYSCTQCGKDFCHQHTLFEH
QKIHTEERPYECSECGKLFRYNSDLIKHQRNHTGERPYKCSECGKAFSLKYNVVQHQKIHTGERPYECSE
CGKAFLRKSHLLQHQRIHTRPRPYVCSECGKAFLTQAHLVGHQKIHTGERPYGCNECGKYFMYSSALIRH
QKVHTGERPFYCCECGKFFMDSCTLIIHQRVHTGEKPYECNECGKFFRYRSTLIRHQKVHTGEKPYECSE
CGKFFMDTSTLIIHQRVHTGEKPYECNKCGKFFRYCFTLNRHQRVHSGERPYECSECGKFFVDSCTLKSH
QRVHTGERPFECSICGKSFRCRSTLDTHQRIHTGERPYECSECGKFFRHNSNHIRHRRNHFGERSFECTE
CGRVFSQNSHLIRHQKVHTRERTYKCSKCGKFFMDSSTLISHERVHTGEKPYECSECGKVFRYNSSLIKH
RRIHTGERPYQCSECGRVFNQNSHLIQHQKVHTR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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