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Report for CCDS82486.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82486.1 Public Homo sapiens 2 TBC1D8 24 110 108 CCDS HistoryNCBI Gene:11138Re-query CCDS DB by CCDS ID:82486.1Re-query CCDS DB by GeneID:11138See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82486.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409318.2 ENSP00000386856.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000409318.2Link to Ensembl Protein Viewer:ENSP00000386856.1Re-query CCDS DB by Nucleotide ID:ENST00000409318Re-query CCDS DB by Protein ID:ENSP00000386856
Original member Current member NCBI NM_001330348.2 NP_001317277.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001330348.2Link to Protein Sequence:NP_001317277.1Re-query CCDS DB by Nucleotide ID:NM_001330348Re-query CCDS DB by Protein ID:NP_001317277Link to BLAST:NP_001317277.1

Chromosomal Locations for CCDS 82486.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 101007821 101008273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 101010929 101011026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 101011451 101011540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 101021681 101021746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 101022281 101022521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 101027383 101027451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 101028048 101028146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 101028303 101028432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 101029491 101029776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 101032268 101032385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 101033544 101033758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 101036018 101036168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 101037532 101037708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 101038461 101038655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 101040178 101040385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 101050401 101050641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 101054108 101054336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 101059421 101059539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 101090209 101090364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 101151127 101151253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3468 nt):
ATGTGGCTCAAGCCCGAGGAGGTGCTGCTGAAGAACGCGCTGAAGCTCTGGGTGACCCAGAAGAGCAGCT
GCTACTTCATCCTGCAGCGGCGCCGCGGGCACGGCGAGGGGGGCGGCCGCCTCACCGGTCGCCTGGTCGG
CGCTCTGGATGCAGTGTTGGATTCCAATGCACGGGTCGCTCCATTTCGAATTCTGCTTCAAGTTCCCGGC
TCCCAGGTTTATTCTCCCATAGCATGTGGTGAGTTACTGAATGGATCAGACGTTTACTGGGCCATAGCCA
CTGGTGCAACATTAGAGGAAATCAATCAGCACTGGGACTGGCTGGAACAAAATCTCCTCCACACCTTGTC
TGTCTTTGATAATAAAGATGACATTGCCAGTTTTGTCAAAGGGAAGGTAAAGGCTCTGATAGCCGAGGAG
ACCAGCAGCAGGCTCGCCGAGCAGGAGGAGGAACCCGAGAAATTCCGAGAAGCCCTGGTGAAGTTCGAGG
CCAGGTTCAACTTCCCCGAGGCGGAGAAGCTGGTCACCTACTACTCCTGCTGCTGTTGGAAGGGCAGGGT
GCCCCGCCAGGGCTGGCTGTACCTCAGCATCAACCACCTCTGCTTCTACTCCTTCTTCCTGGGCAAGGAA
CTTAAACTTGTGGTTCCGTGGGTTGATATCCAGAAATTAGAAAGAACGTCCAATGTCTTTCTGACGGATA
CCATCCGAATCACCACGCAGAATAAGGAGCGTGACTTCTCCATGTTCCTGAACCTGGATGAGGTGTTTAA
GGTCATGGAGCAGCTGGCCGACGTGACGCTGCGAAGGCTGCTGGATAATGAGGTCTTTGACCTCGACCCC
GATCTGCAGGAGCCGAGCCAGATCACCAAGAGGGACCTGGAAGCCAGAGCACAGAATGAGTTCTTCCGGG
CTTTCTTCAGGTTGCCGAGGAAGGAGAAGCTGCACGCGGTTGTGGACTGTTCGCTCTGGACGCCGTTCAG
TCGCTGTCACACCACGGGGCGGATGTTCGCCTCTGACAGCTACATCTGCTTTGCCAGCAGAGAAGATGGC
TGCTGTAAGATCATCCTGCCACTCAGAGAGGTGGTGAGCATCGAGAAGATGGAGGACACGAGCCTGCTGC
CGCATCCCATCATTGTCAGTATCAGAAGCAAGGTGGCCTTCCAGTTCATTGAGCTCCGGGACCGAGACAG
CCTGGTGGAGGCGCTGCTTGCGAGGTTGAAGCAGGTCCACGCCAACCACCCCGTGCACTACGACACCTCT
GCGGATGATGACATGGCTTCACTCGTGTTTCATTCAACAAGCATGTGCAGTGACCACAGATTTGGGGATC
TTGAAATGATGTCTTCTCAAAATAGCGAGGAGAGTGAGAAAGAGAAGAGCCCGCTGATGCACCCCGATGC
CCTGGTCACCGCCTTCCAGCAGTCAGGCAGCCAGAGCCCTGACTCCCGAATGTCCAGAGAACAGATAAAA
ATAAGCCTGTGGAATGACCACTTTGTGGAATACGGCAGAACCGTGTGTATGTTTCGCACAGAGAAGATTC
GGAAGCTCGTAGCCATGGGCATCCCTGAATCTTTGCGAGGGAGACTCTGGCTTCTCTTCTCAGATGCGGT
GACGGATCTTGCCTCACACCCTGGTTACTACGGGAATCTGGTGGAGGAGTCCCTGGGGAAATGCTGCCTG
GTAACCGAGGAGATAGAACGAGACCTGCACCGCTCCCTGCCAGAGCACCCCGCCTTCCAGAACGAAACGG
GAATTGCTGCTTTGAGGAGAGTCTTGACGGCCTATGCCCACCGGAACCCCAAGATTGGATACTGCCAGTC
CATGAACATCCTGACCTCCGTGCTGCTGCTGTACACCAAGGAGGAGGAAGCCTTCTGGCTGTTGGTTGCT
GTGTGTGAGCGGATGCTGCCCGATTACTTCAACCACCGAGTGATCGGGGCACAAGTTGACCAGTCTGTCT
TCGAGGAGCTCATCAAGGGTCATCTCCCAGAGCTGGCAGAGCACATGAACGACCTCTCAGCCCTGGCGTC
CGTCTCTCTCTCGTGGTTCCTGACCCTGTTCCTCAGCATCATGCCTCTAGAGAGTGCGGTGAATGTGGTA
GACTGCTTCTTCTATGATGGCATCAAAGCCATCTTCCAGCTGGGACTGGCTGTGCTTGAGGCCAATGCTG
AGGACCTGTGCAGCAGCAAGGATGATGGCCAGGCCTTGATGATCCTCAGCAGGTTTCTAGATCACATTAA
GAATGAGGACAGCCCAGGGCCCCCAGTTGGCAGCCACCATGCCTTTTTCTCCGACGACCAGGAGCCCTAC
CCTGTGACTGATATTTCGGACCTGATCCGGGATTCCTATGAGAAATTTGGAGACCAGTCTGTGGAGCAGA
TCGAGCACCTACGTTACAAGCACAGGATCAGGGTCCTCCAAGGCCACGAGGACACCACAAAGCAGAACGT
GCTTCGAGTCGTTATCCCGGAAGTCTCAATTCTTCCTGAAGACCTAGAGGAGCTCTACGACTTATTCAAG
AGAGAACATATGATGAGCTGTTACTGGGAGCAGCCCAGGCCCATGGCCTCACGCCACGACCCCAGCCGGC
CCTATGCTGAGCAGTACCGCATAGATGCCCGGCAGTTTGCACACCTGTTTCAGCTAGTCTCGCCCTGGAC
CTGCGGGGCCCACACGGAGATCCTCGCCGAAAGGACGTTCAGGCTCTTGGATGACAACATGGACCAGCTC
ATCGAGTTCAAAGCGTTTGTGAGCTGCCTCGATATTATGTATAATGGAGAAATGAATGAGAAGATTAAAC
TATTATACAGGCTTCATATCCCTCCAGCACTCACTGAAAATGACCGAGACAGCCAGTCGCCGTTGAGGAA
TCCTCTGTTGTCAACATCGAGACCCCTGGTTTTCGGGAAACCCAATGGTGATGCAGTTGATTATCAGAAA
CAGCTGAAGCAGATGATTAAGGATTTAGCCAAAGAAAAAGATAAAACTGAGAAAGAATTGCCCAAAATGA
GCCAGAGAGAATTTATCCAGTTCTGTAAAACTCTGTACAGTATGTTCCATGAAGATCCAGAAGAAAATGA
TTTGTATCAAGCCATCGCCACAGTCACCACACTGCTGCTGCAGATCGGGGAGGTGGGGCAGCGAGGCAGC
AGCTCTGGAAGCTGCTCCCAGGAGTGTGGGGAGGAGCTGCGGGCTTCAGCTCCTTCTCCTGAGGACTCGG
TTTTTGCAGACACTGGGAAGACGCCCCAGGACTCCCAGGCATTTCCAGAGGCGGCAGAAAGGGACTGGAC
TGTCTCCCTTGAACATATTTTAGCTTCACTTCTGACTGAACAGTCATTAGTCAACTTTTTTGAAAAGCCA
CTGGACATGAAATCCAAACTTGAAAATGCCAAGATCAATCAGTACAATCTCAAAACTTTTGAAATGAGCC
ACCAATCACAATCTGAACTTAAGCTGAGTAACTTGTAG

Translation (1155 aa):
MWLKPEEVLLKNALKLWVTQKSSCYFILQRRRGHGEGGGRLTGRLVGALDAVLDSNARVAPFRILLQVPG
SQVYSPIACGELLNGSDVYWAIATGATLEEINQHWDWLEQNLLHTLSVFDNKDDIASFVKGKVKALIAEE
TSSRLAEQEEEPEKFREALVKFEARFNFPEAEKLVTYYSCCCWKGRVPRQGWLYLSINHLCFYSFFLGKE
LKLVVPWVDIQKLERTSNVFLTDTIRITTQNKERDFSMFLNLDEVFKVMEQLADVTLRRLLDNEVFDLDP
DLQEPSQITKRDLEARAQNEFFRAFFRLPRKEKLHAVVDCSLWTPFSRCHTTGRMFASDSYICFASREDG
CCKIILPLREVVSIEKMEDTSLLPHPIIVSIRSKVAFQFIELRDRDSLVEALLARLKQVHANHPVHYDTS
ADDDMASLVFHSTSMCSDHRFGDLEMMSSQNSEESEKEKSPLMHPDALVTAFQQSGSQSPDSRMSREQIK
ISLWNDHFVEYGRTVCMFRTEKIRKLVAMGIPESLRGRLWLLFSDAVTDLASHPGYYGNLVEESLGKCCL
VTEEIERDLHRSLPEHPAFQNETGIAALRRVLTAYAHRNPKIGYCQSMNILTSVLLLYTKEEEAFWLLVA
VCERMLPDYFNHRVIGAQVDQSVFEELIKGHLPELAEHMNDLSALASVSLSWFLTLFLSIMPLESAVNVV
DCFFYDGIKAIFQLGLAVLEANAEDLCSSKDDGQALMILSRFLDHIKNEDSPGPPVGSHHAFFSDDQEPY
PVTDISDLIRDSYEKFGDQSVEQIEHLRYKHRIRVLQGHEDTTKQNVLRVVIPEVSILPEDLEELYDLFK
REHMMSCYWEQPRPMASRHDPSRPYAEQYRIDARQFAHLFQLVSPWTCGAHTEILAERTFRLLDDNMDQL
IEFKAFVSCLDIMYNGEMNEKIKLLYRLHIPPALTENDRDSQSPLRNPLLSTSRPLVFGKPNGDAVDYQK
QLKQMIKDLAKEKDKTEKELPKMSQREFIQFCKTLYSMFHEDPEENDLYQAIATVTTLLLQIGEVGQRGS
SSGSCSQECGEELRASAPSPEDSVFADTGKTPQDSQAFPEAAERDWTVSLEHILASLLTEQSLVNFFEKP
LDMKSKLENAKINQYNLKTFEMSHQSQSELKLSNL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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