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Report for CCDS82490.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82490.1 Public Homo sapiens 2 TMEM182 24 110 108 CCDS HistoryNCBI Gene:130827Re-query CCDS DB by CCDS ID:82490.1Re-query CCDS DB by GeneID:130827See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82490.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409528.5 ENSP00000387258.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409528.5Link to Ensembl Protein Viewer:ENSP00000387258.1Re-query CCDS DB by Nucleotide ID:ENST00000409528Re-query CCDS DB by Protein ID:ENSP00000387258
Original member Current member NCBI NM_001321345.2 NP_001308274.2 Accepted alive Link to Nucleotide Sequence:NM_001321345.2Link to Protein Sequence:NP_001308274.2Re-query CCDS DB by Nucleotide ID:NM_001321345Re-query CCDS DB by Protein ID:NP_001308274Link to BLAST:NP_001308274.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001308274.2 133 Q6ZP80-2 133 100% 0 0

Chromosomal Locations for CCDS 82490.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 102764385 102764427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 102797863 102798000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 102814748 102814968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (402 nt):
ATGAGAGGCGAGCACAACTCGACCTCCTATGACTCTGCAGTTATTTACCGTGGTTTCTGGGCAGTCCTGA
TGCTCCTGGGGGTAGTTGCTGTAGTCATCGCAAGCTTTTTGATCATCTGTGCAGCCCCCTTCGCCAGCCA
TTTTCTCTACAAAGCTGGGGGAGGCTCATATATTGCTGCAGGCATCCTATTTTCATTGGTGGTGATGCTG
TATGTCATCTGGGTCCAGGCAGTGGCTGACATGGAAAGCTACCGAAACATGAAAATGAAGGACTGCCTGG
ATTTCACCCCTTCTGTTCTGTATGGCTGGTCATTTTTCCTGGCCCCAGCTGGGATATTTTTTTCTTTGCT
AGCTGGATTACTATTTCTGGTTGTTGGATGGCATATTCAGATACATCACTAA

Translation (133 aa):
MRGEHNSTSYDSAVIYRGFWAVLMLLGVVAVVIASFLIICAAPFASHFLYKAGGGSYIAAGILFSLVVML
YVIWVQAVADMESYRNMKMKDCLDFTPSVLYGWSFFLAPAGIFFSLLAGLLFLVVGWHIQIHH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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