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Report for CCDS82507.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82507.1 Public Homo sapiens 2 TEX51 24 110 108 CCDS HistoryNCBI Gene:101929926Re-query CCDS DB by CCDS ID:82507.1Re-query CCDS DB by GeneID:101929926See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82507.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000568484.6 ENSP00000489776.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000568484.6Link to Ensembl Protein Viewer:ENSP00000489776.1Re-query CCDS DB by Nucleotide ID:ENST00000568484Re-query CCDS DB by Protein ID:ENSP00000489776
Original member Current member EBI ENST00000450035.5 ENSP00000490030.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000450035.5Link to Ensembl Protein Viewer:ENSP00000490030.1Re-query CCDS DB by Nucleotide ID:ENST00000450035Re-query CCDS DB by Protein ID:ENSP00000490030
Original member Current member NCBI NM_001322244.2 NP_001309173.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001322244.2Link to Protein Sequence:NP_001309173.1Re-query CCDS DB by Nucleotide ID:NM_001322244Re-query CCDS DB by Protein ID:NP_001309173Link to BLAST:NP_001309173.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001309173.1 166 A0A1B0GUA7 166 100% 0 0

Chromosomal Locations for CCDS 82507.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 126898919 126899063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126899217 126899291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126899523 126899612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126899936 126900019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126901210 126901278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126901365 126901402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (501 nt):
ATGCTGCCTCTCCTGATCATCTGTCTCCTGCCTGCCATTGAAGGGAAGAACTGCCTCCGCTGCTGGCCAG
AACTGTCTGCCTTGATAGACTATGACCTGCAGATCCTCTGGGTGACCCCAGGGCCACCCACAGAACTTTC
TCAAAATCGTGACCATTTGGAAGAAGAAACAGCCAAATTCTTCACTCAAGTACACCAAGCCATTAAAACG
TTACGAGATGATAAAACAGTACTTCTGGAAGAGATCTACACGCACAAGAATCTCTTTACTGAGAGGCTGA
ATAAGATATCTGATGGGCTGAAGGAGAAGGACATACAGTCCACACTGAAGGTCACCAGCTGTGCTGACTG
CAGGACTCACTTCCTCTCCTGCAATGACCCCACTTTCTGCCCAGCCAGGAACCGGCGGACCTCCCTGTGG
GCTGTGAGTCTCAGCAGTGCTCTACTCCTGGCCATAGCTGGAGATGTTTCTTTTACTGGCAAAGGAAGAA
GGAGGCAGTAA

Translation (166 aa):
MLPLLIICLLPAIEGKNCLRCWPELSALIDYDLQILWVTPGPPTELSQNRDHLEEETAKFFTQVHQAIKT
LRDDKTVLLEEIYTHKNLFTERLNKISDGLKEKDIQSTLKVTSCADCRTHFLSCNDPTFCPARNRRTSLW
AVSLSSALLLAIAGDVSFTGKGRRRQ


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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