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Report for CCDS8265.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8265.1 Public Homo sapiens 11 ANKRD42 24 110 108 CCDS HistoryNCBI Gene:338699Re-query CCDS DB by CCDS ID:8265.1Re-query CCDS DB by GeneID:338699See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8265.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393392.6 ENSP00000377051.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393392.6Link to Ensembl Protein Viewer:ENSP00000377051.2Re-query CCDS DB by Nucleotide ID:ENST00000393392Re-query CCDS DB by Protein ID:ENSP00000377051
Original member Current member NCBI NM_182603.4 NP_872409.2 Accepted alive Link to Nucleotide Sequence:NM_182603.4Link to Protein Sequence:NP_872409.2Re-query CCDS DB by Nucleotide ID:NM_182603Re-query CCDS DB by Protein ID:NP_872409Link to BLAST:NP_872409.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_872409.2 389 Q8N9B4-1 389 100% 0 0

Chromosomal Locations for CCDS 8265.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 83194671 83194728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83198479 83198558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83206058 83206165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83210300 83210419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83211295 83211430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83224855 83225055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83227747 83227872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83236404 83236509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83240759 83240934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83247943 83248001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1170 nt):
ATGCCCGGGGTGGCCAATTCAGGCCCCTCCACTTCCTCTAGGGAGACTGCAAACCCCTGTTCCAGGAAGA
AGGTGCATTTTGGCAGCATACATGATGCAGTACGAGCTGGAGATGTAAAGCAGCTTTCAGAAATAGTGTG
TCTTCATTGGCTGCTCTGGCATGGAGCTGATATCACACACGTAACAACGAGAGGTTGGACAGCATCTCAC
ATAGCTGCAATCAGGGGTCAGGATGCTTGTGTACAGGCTCTTATAATGAATGGAGCAAATCTGACAGCCC
AGGATGACCGGGGATGCACTCCTTTACATCTTGCTGCAACTCATGGACATTCTTTCACTTTACAAATAAT
GCTCCGAAGTGGAGTGGATCCCAGTGTGACTGATAAGAGAGAATGGAGACCTGTGCATTATGCAGCTTTT
CATGGGCGGCTTGGCTGCTTGCAACTTCTTGTTAAATGGGGTTGTAGCATAGAAGATGTGGACTACAATG
GAAACCTTCCAGTTCACTTAGCAGCCATGGAAGGCCACCTTCACTGTTTCAAATTCCTAGTCAGTAGAAT
GAGCAGTGCGACGCAAGTTTTAAAAGCTTTCAATGATAATGGAGAAAATGTACTGGATTTGGCCCAGAGG
TTCTTCAAGCAGAACATTTTACAGTTTATCCAGGGGGCTGAGTATGAAGGAAAAGACCTAGAGGATCAGG
AAACTTTAGCATTTCCAGGTCATGTGGCTGCCTTTAAGGGTGATTTGGGGATGCTTAAGAAATTAGTGGA
AGATGGAGTAATCAATATTAATGAGCGTGCTGATAATGGATCAACTCCTATGCATAAAGCTGCTGGACAA
GGCCACATAGAGTGTTTGCAGTGGTTAATTAAAATGGGAGCAGACAGTAATATTACCAACAAAGCAGGGG
AGAGACCCAGTGATGTGGCAAAGAGGTTTGCCCATTTGGCAGCAGTGAAGCTGTTAGAGGAGCTACAGAA
ATATGATATAGATGACGAAAATGAAATTGATGAAAATGATGTGAAATATTTTATAAGACATGGTGTTGAG
GGAAGCACTGATGCCAAGGATGATTTATGTCTGAGTGACTTGGATAAAACAGATGCCAGAAGACCATCAA
AGAACTGCAGGGCCAGCTGGAGTATGAACGACTACGTAGAGAAAAATTAG

Translation (389 aa):
MPGVANSGPSTSSRETANPCSRKKVHFGSIHDAVRAGDVKQLSEIVCLHWLLWHGADITHVTTRGWTASH
IAAIRGQDACVQALIMNGANLTAQDDRGCTPLHLAATHGHSFTLQIMLRSGVDPSVTDKREWRPVHYAAF
HGRLGCLQLLVKWGCSIEDVDYNGNLPVHLAAMEGHLHCFKFLVSRMSSATQVLKAFNDNGENVLDLAQR
FFKQNILQFIQGAEYEGKDLEDQETLAFPGHVAAFKGDLGMLKKLVEDGVININERADNGSTPMHKAAGQ
GHIECLQWLIKMGADSNITNKAGERPSDVAKRFAHLAAVKLLEELQKYDIDDENEIDENDVKYFIRHGVE
GSTDAKDDLCLSDLDKTDARRPSKNCRASWSMNDYVEKN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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