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Report for CCDS83121.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83121.1 Public Homo sapiens 6 FABP7 24 110 108 CCDS HistoryNCBI Gene:2173Re-query CCDS DB by CCDS ID:83121.1Re-query CCDS DB by GeneID:2173See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83121.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356535.4 ENSP00000348931.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000356535.4Link to Ensembl Protein Viewer:ENSP00000348931.4Re-query CCDS DB by Nucleotide ID:ENST00000356535Re-query CCDS DB by Protein ID:ENSP00000348931
Original member Current member NCBI NM_001319039.2 NP_001305968.1 Accepted alive Link to Nucleotide Sequence:NM_001319039.2Link to Protein Sequence:NP_001305968.1Re-query CCDS DB by Nucleotide ID:NM_001319039Re-query CCDS DB by Protein ID:NP_001305968Link to BLAST:NP_001305968.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001305968.1 166 O15540-2 166 100% 0 0

Chromosomal Locations for CCDS 83121.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 122779795 122779867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 122780291 122780463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 122781093 122781347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (501 nt):
ATGGTGGAGGCTTTCTGTGCTACCTGGAAGCTGACCAACAGTCAGAACTTTGATGAGTACATGAAGGCTC
TAGGCGTGGGCTTTGCCACTAGGCAGGTGGGAAATGTGACCAAACCAACGGTAATTATCAGTCAAGAAGG
AGACAAAGTGGTCATCAGGACTCTCAGCACATTCAAGAACACGGAGATTAGTTTCCAGCTGGGAGAAGAG
TTTGATGAAACCACTGCAGATGATAGAAACTGTAAGTCTGTTGTTAGCCTGGATGGAGACAAACTTGTTC
ACATACAGAAATGGGATGGCAAAGAAACAAATTTTGTAAGAGAAATTAAGGATGGCAAAATGGTTATGGT
AAGTAATGACAATTCTCCATTCTTCCTTGTTTTTTTCTCCTCTCCGCACACCTCTCACCTCCTTCCTTCT
TCTTCCCTCCTCCTTCCATTCTTCCTCCTTCCTTCCTTCTTTAATAATACATCACTGGCAAGGTTCTTTA
ACTATATGTAA

Translation (166 aa):
MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTLSTFKNTEISFQLGEE
FDETTADDRNCKSVVSLDGDKLVHIQKWDGKETNFVREIKDGKMVMVSNDNSPFFLVFFSSPHTSHLLPS
SSLLLPFFLLPSFFNNTSLARFFNYM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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