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Report for CCDS83733.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83733.1 Public Mus musculus 10 Lmnb2 23 108 98 CCDS HistoryNCBI Gene:16907Re-query CCDS DB by CCDS ID:83733.1Re-query CCDS DB by GeneID:16907See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83733.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000105332.2 ENSMUSP00000100969.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000105332.2Link to Ensembl Protein Viewer:ENSMUSP00000100969.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000105332Re-query CCDS DB by Protein ID:ENSMUSP00000100969
Original member Current member NCBI NM_001347140.1 NP_001334069.1 Accepted alive Link to Nucleotide Sequence:NM_001347140.1Link to Protein Sequence:NP_001334069.1Re-query CCDS DB by Nucleotide ID:NM_001347140Re-query CCDS DB by Protein ID:NP_001334069Link to BLAST:NP_001334069.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001334069.1 474 P21619-2 474 100% 0 0

Chromosomal Locations for CCDS 83733.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 80902859 80902900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80903212 80903322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80903450 80903569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80903931 80904038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80904115 80904388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80904553 80904773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80904886 80905011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80905081 80905251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80906004 80906255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1425 nt):
ATGGGGGAGTCGGAATCCATGAGAGGCACTGGAGAGGGATGCGGGAGGGACTGCCCGGAGGCAGCCCGCC
CTTTGATGGAGACCGTGGAGGGAGCTCTGCCGGAGCTCAGAGGGAGGCCTCTGAGGGAGTATGTGAAACG
ACGTCCGAGGGGGCTTGGGAAGACCCCCGTGGAGGATCCTGTGAAGTCAGAGGGGGCTGTGGGGTATCCC
AGGACTTGGAACAACCACCTCAGGGTCCCCACAAGAGAGCAGGAGGTACGGGAGACCCGACGGAGGCACG
AGCGGCGCTTGGTGGAGGTGGACAGCAGCCGGCAACAGGAATATGACTTCAAGATGGCTCAGGCCCTGGA
GGACCTGCGCAGTCAGCACGATGAGCAAGTGCGCCTGTACCGGGTAGAACTGGAGCAGACCTACCAGGCC
AAGCTGGACAACGCCAAGCTGCTCTCGGACCAGAATGACAAGGCAGCCCATGCAGCCCGCGAGGAGCTCA
AGGAGGCCCGCATGCGCGTGGAGTCCCTCAGCTACCAGCTTTTAGGCCTCCAAAAGCAGGCCAGTGCTGC
AGAGAACCACATCCATGAGCTGGAGGAGGCCTTGGCTGGGGAGCGTGACAAGTTCCGCAAGATGCTGGAC
GCTAAGGAACAGGAGATGACGGAGGTGCGGGACGCCATGCAGCAGCAGCTGGCAGAGTACCAAGAGCTGC
TGGACATTAAGCTGGCCCTGGACATGGAGATAAGCGCCTACCGCAAGCTGCTGGAGGGCGAGGAGGAGAG
GCTGAAGCTGTCTCCCAGCCCTTCATCACGGATCACCATCTCTCGGGCCACATCGAGCAGCAGCAGCAGC
AGCGGGGTTGGCATGTCTGTGGGCCAGGGCCGGGGCAAGCGCCGGCGGCTGGAGACTGAGGACACCTCAG
GCTCACCCAGCAGGGCTTCCAGAGTGAGCAGCGGCTCCCGCCTGGCTCAGCAGACTGTGGCCACGGGTGT
TGTGAACATCGACGAGGTGGACCCAGAGGGCAGGTTCGTGCGCCTTAAGAACTCTTCAGACAAGGACCAG
TCTTTGGGGAACTGGAGGATCAAGAGACAGGTTCTGGAGGGTGAGGACATTGCCTACAAGTTCACACCCA
AGTATGTCCTGCGGGCCGGCCAGACTGTCACGGTGTGGGCAGCTGGCGCAGGGGCTACCCACAGTCCCCC
ATCAACCCTTGTGTGGAAAAGCCAGACCAACTGGGGCCCTGGGGAGAGCTTCCGCACTGCCCTGGTCAGT
GCCGACGGTGAGGAGGTGGCCGTGAAGGCTGCAAAGCACTCATCTGTCCAGGGGAGGGAGAACGGGGAAG
AGGAGGAAGAGGAAGAGGCAGAATTCGGTGAAGAGGACCTCTTCCACCAGCAGGGGGACCCAAGGACTAC
CTCAAGGGGCTGCCGACTGATGTGA

Translation (474 aa):
MGESESMRGTGEGCGRDCPEAARPLMETVEGALPELRGRPLREYVKRRPRGLGKTPVEDPVKSEGAVGYP
RTWNNHLRVPTREQEVRETRRRHERRLVEVDSSRQQEYDFKMAQALEDLRSQHDEQVRLYRVELEQTYQA
KLDNAKLLSDQNDKAAHAAREELKEARMRVESLSYQLLGLQKQASAAENHIHELEEALAGERDKFRKMLD
AKEQEMTEVRDAMQQQLAEYQELLDIKLALDMEISAYRKLLEGEEERLKLSPSPSSRITISRATSSSSSS
SGVGMSVGQGRGKRRRLETEDTSGSPSRASRVSSGSRLAQQTVATGVVNIDEVDPEGRFVRLKNSSDKDQ
SLGNWRIKRQVLEGEDIAYKFTPKYVLRAGQTVTVWAAGAGATHSPPSTLVWKSQTNWGPGESFRTALVS
ADGEEVAVKAAKHSSVQGRENGEEEEEEEAEFGEEDLFHQQGDPRTTSRGCRLM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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