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Report for CCDS8403.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8403.1 Public Homo sapiens 11 BCL9L 24 110 108 CCDS HistoryNCBI Gene:283149Re-query CCDS DB by CCDS ID:8403.1Re-query CCDS DB by GeneID:283149See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8403.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334801.7 ENSP00000335320.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000334801.7Link to Ensembl Protein Viewer:ENSP00000335320.3Re-query CCDS DB by Nucleotide ID:ENST00000334801Re-query CCDS DB by Protein ID:ENSP00000335320
Original member Current member EBI ENST00000683865.1 ENSP00000507778.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000683865.1Link to Ensembl Protein Viewer:ENSP00000507778.1Re-query CCDS DB by Nucleotide ID:ENST00000683865Re-query CCDS DB by Protein ID:ENSP00000507778
Original member Current member NCBI NM_001378213.1 NP_001365142.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001378213.1Link to Protein Sequence:NP_001365142.1Re-query CCDS DB by Nucleotide ID:NM_001378213Re-query CCDS DB by Protein ID:NP_001365142Link to BLAST:NP_001365142.1
Original member Current member NCBI NM_182557.4 NP_872363.1 Accepted alive Link to Nucleotide Sequence:NM_182557.4Link to Protein Sequence:NP_872363.1Re-query CCDS DB by Nucleotide ID:NM_182557Re-query CCDS DB by Protein ID:NP_872363Link to BLAST:NP_872363.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001365142.1 1499 Q86UU0-1 1499 100% 0 0
NP_872363.1 1499 Q86UU0-1 1499 100% 0 0

Chromosomal Locations for CCDS 8403.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 118898415 118899508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118899917 118900198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118900619 118902908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118902990 118903074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118903236 118903452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118907483 118907602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118908270 118908655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118909914 118909939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4500 nt):
ATGAGGATCCTGGCTAACAAGACAAGGTTACCCCACCCCAGGAGGAGAGAAGCTCCAGGGAGCCCGCCGC
TGTCCCCCCGCGGTCATTGCCCCCCTGCCCCAGCCAAGCCAATGCACCCAGAAAATAAATTGACCAATCA
TGGCAAGACAGGGAATGGCGGGGCCCAATCTCAGCACCAGAATGTGAACCAAGGACCCACCTGCAACGTG
GGCTCGAAGGGCGTGGGGGCGGGGAACCATGGGGCCAAGGCCAACCAGATCTCGCCTAGCAACTCAAGTC
TGAAGAACCCCCAGGCAGGGGTGCCCCCTTTCAGCTCGCTCAAGGGCAAGGTGAAGAGGGACCGGAGTGT
GTCTGTGGACTCTGGAGAGCAGCGAGAGGCTGGGACCCCATCCCTGGATTCAGAGGCCAAAGAGGTGGCG
CCGCGGAGTAAGCGGCGCTGTGTGCTGGAGCGGAAGCAGCCGTACAGTGGGGACGAATGGTGCTCTGGAC
CGGACAGTGAGGAGGACGACAAGCCCATTGGGGCCACCCACAATTGTAATGTAGCAGACCCAGCCATGGC
GGCCCCACAGCTGGGTCCCGGCCAAACCACCCAACTGCCCCTCAGCGAGAGCAGCGTGCCAGGCGCCCCG
CACGGCCCTCCTCCTGGCCTTCGGCCTGATGCCCCTGGGGGCGGGGGCGGGGGCGGGGGCGTCCCCGGAA
AGCCTCCCTCGCAGTTCGTATATGTCTTCACCACCCACCTGGCCAACACGGCTGCAGAGGCAGTGCTGCA
GGGCCGGGCCGACTCCATCCTCGCCTACCACCAGCAGAACGTGCCCCGGGCCAAGCTTGACCAGGCCCCT
AAAGTGCCCCCCACCCCAGAACCGCTACCCCTGAGCACGCCGTCAGCAGGCACCCCGCAGTCCCAGCCAC
CTCCACTGCCGCCGCCGCCACCCCCGGCCCCTGGCAGTGCCCCGCCTGCTCTGCCCCCAGAGGGGCCTCC
TGAGGACAGCAGTCAGGACCTGGCCCCCAACTCGGTGGGAGCTGCCAGCACAGGTGGTGGGACTGGGGGC
ACCCACCCTAACACCCCGACGGCTACCACCGCCAACAACCCTCTGCCTCCTGGAGGAGACCCCAGCAGTG
CCCCCGGCCCTGCCCTGCTGGGGGAGGCAGCCGCCCCTGGAAATGGGCAGCGCAGCCTGGTGGGCTCAGA
GGGCTTGTCCAAAGAGCAGCTGGAGCATCGGGAACGGTCCCTCCAGACGCTGCGAGACATTGAGCGACTG
CTGCTCCGCAGCGGAGAGACTGAGCCCTTCCTCAAGGGGCCCCCAGGAGGAGCGGGTGAGGGGGGCCCAC
CAGCACAAGCCCCCCCTCCCCCCCAGCAGCCACCCACGGCCCCTCCCAGCGGGCTGAAGAAATATGAGGA
ACCCTTGCAGTCCATGATTTCACAGACACAGAGCCTAGGGGGCCCCCCGCTGGAGCATGAAGTGCCTGGG
CACCCCCCGGGTGGGGACATGGGGCAGCAGATGAACATGATGATACAGAGGCTGGGCCAGGACAGCCTCA
CGCCTGAGCAGGTGGCCTGGCGCAAGCTGCAGGAGGAGTACTACGAAGAGAAACGGCGGAAAGAGGAACA
GATTGGGCTGCATGGGAGCCGTCCTCTGCAGGACATGATGGGCATGGGGGGCATGATGGTGAGGGGGCCC
CCGCCTCCTTACCACAGCAAGCCTGGGGATCAGTGGCCACCTGGAATGGGTGCGCAGCTGCGGGGGCCCA
TGGATGTTCAAGATCCCATGCAGCTCCGGGGCGGACCTCCCTTTCCTGGGCCCCGTTTCCCAGGCAACCA
GATACAACGGGTACCTGGGTTTGGGGGCATGCAGAGTATGCCCATGGAGGTGCCCATGAATGCCATGCAG
AGGCCCGTGAGACCAGGCATGGGCTGGACCGAAGACTTGCCCCCTATGGGGGGACCCAGCAATTTTGCCC
AGAACACCATGCCCTACCCAGGTGGGCAGGGTGAGGCGGAGCGATTCATGACTCCCCGGGTCCGTGAGGA
GCTGCTGCGGCACCAGCTGCTGGAGAAGCGGTCGATGGGCATGCAGCGCCCCCTGGGCATGGCAGGCAGT
GGCATGGGACAGAGCATGGAGATGGAGCGGATGATGCAGGCGCACCGACAGATGGATCCTGCCATGTTTC
CCGGGCAGATGGCTGGTGGTGAGGGCCTGGCGGGCACTCCCATGGGCATGGAGTTTGGTGGAGGCCGGGG
CCTCCTGAGCCCTCCCATGGGGCAGTCTGGGCTGAGGGAGGTGGACCCACCCATGGGGCCAGGCAACCTC
AACATGAACATGAATGTCAACATGAACATGAACATGAACCTGAACGTGCAGATGACCCCGCAGCAGCAGA
TGCTGATGTCGCAGAAGATGCGGGGCCCTGGGGACTTGATGGGGCCCCAGGGCCTCAGTCCTGAGGAGAT
GGCCCGGGTTCGGGCCCAGAACAGCAGTGGCGTGATGGGCGGCCCGCAGAAGATGCTGATGCCTTCACAG
TTTCCCAACCAGGGCCAGCAGGGATTCTCTGGAGGCCAGGGACCCTACCAAGCCATGTCCCAGGACATGG
GCAATACCCAAGACATGTTCAGCCCTGATCAGAGCTCAATGCCCATGAGCAACGTGGGCACCACCCGGCT
CAGCCACATGCCTCTGCCCCCTGCGTCCAATCCTCCTGGGACCGTGCATTCAGCCCCAAACCGGGGGCTA
GGCAGGCGGCCTTCGGACCTCACCATCAGTATTAATCAGATGGGCTCACCGGGCATGGGGCACTTGAAGT
CGCCCACCCTTAGCCAGGTGCACTCACCCCTGGTCACCTCGCCCTCTGCCAACCTCAAGTCACCCCAGAC
TCCCTCACAGATGGTGCCCTTGCCTTCTGCCAACCCGCCAGGACCTCTCAAGTCGCCCCAGGTCCTCGGC
TCCTCCCTCAGTGTCCGTTCACCCACTGGCTCGCCCAGCAGGCTCAAGTCTCCTTCCATGGCGGTGCCTT
CTCCAGGCTGGGTTGCCTCACCTAAGACGGCCATGCCCAGCCCGGGGGTCTCCCAGAACAAGCAGCCGCC
TCTCAACATGAACTCTTCCACCACCCTGAGCAACATGGAACAGGGTACCCTCCCGCCTAGCGGCCCCCGG
AGCAGCTCCTCAGCACCTCCCGCCAACCCTCCCAGCGGCCTCATGAACCCCAGCCTACCATTCACTTCCT
CCCCAGACCCCACACCTTCCCAGAACCCCCTGTCACTGATGATGACCCAGATGTCCAAGTACGCCATGCC
CAGCTCCACCCCGCTCTACCACAATGCCATCAAGACCATCGCCACCTCAGACGACGAGCTGCTGCCCGAC
CGGCCCCTGCTGCCCCCCCCACCACCACCGCAGGGCTCCGGGCCAGGGATCAGCAACAGCCAGCCCAGCC
AGATGCACCTGAACTCAGCCGCTGCCCAGAGCCCTATGGGCATGAACCTGCCAGGCCAGCAGCCCCTGTC
CCATGAGCCCCCGCCCGCCATGCTGCCCTCCCCCACCCCTCTGGGCTCCAACATTCCACTGCATCCCAAC
GCACAGGGGACAGGGGGGCCCCCTCAAAACTCCATGATGATGGCCCCAGGGGGCCCCGACTCCCTGAATG
CCCCCTGTGGCCCAGTGCCCAGCTCCTCCCAGATGATGCCCTTCCCCCCTCGGCTGCAGCAGCCCCATGG
TGCCATGGCCCCCACTGGGGGTGGGGGCGGGGGGCCTGGCCTGCAGCAGCACTACCCGTCAGGCATGGCC
CTGCCTCCCGAGGACCTGCCCAACCAGCCGCCAGGCCCCATGCCTCCCCAGCAGCACCTGATGGGCAAAG
CCATGGCTGGGCGCATGGGCGACGCATACCCACCGGGTGTGCTCCCTGGGGTGGCATCAGTGCTGAACGA
CCCCGAGCTGAGCGAGGTGATCCGGCCCACCCCAACGGGGATCCCCGAGTTCGACTTGTCGAGGATCATC
CCCTCTGAGAAGCCAAGCAGCACCCTCCAGTACTTCCCCAAGAGCGAGAACCAGCCCCCCAAGGCTCAGC
CCCCTAATCTGCATCTCATGAACCTGCAGAACATGATGGCGGAGCAGACTCCCTCTCGGCCTCCCAACCT
CCCAGGCCAGCAGGGCGTCCAGCGGGGGCTCAACATGTCCATGTGCCACCCTGGACAGATGTCCTTGCTG
GGCAGGACAGGCGTGCCCCCACAGCAGGGGATGGTGCCCCATGGCCTGCACCAGGGGGTCATGTCCCCTC
CACAAGGCCTCATGACCCAGCAGAATTTCATGCTGATGAAGCAGCGGGGCGTGGGGGGCGAGGTCTACAG
CCAGCCGCCCCACATGCTCTCCCCGCAGGGCTCCCTCATGGGCCCCCCGCCCCAGCAGAACCTCATGGTG
TCCCACCCCCTTCGGCAGCGCAGTGTGTCCCTGGACAGCCAGATGGGCTACCTCCCGGCACCAGGCGGCA
TGGCCAACCTGCCCTTCTAG

Translation (1499 aa):
MRILANKTRLPHPRRREAPGSPPLSPRGHCPPAPAKPMHPENKLTNHGKTGNGGAQSQHQNVNQGPTCNV
GSKGVGAGNHGAKANQISPSNSSLKNPQAGVPPFSSLKGKVKRDRSVSVDSGEQREAGTPSLDSEAKEVA
PRSKRRCVLERKQPYSGDEWCSGPDSEEDDKPIGATHNCNVADPAMAAPQLGPGQTTQLPLSESSVPGAP
HGPPPGLRPDAPGGGGGGGGVPGKPPSQFVYVFTTHLANTAAEAVLQGRADSILAYHQQNVPRAKLDQAP
KVPPTPEPLPLSTPSAGTPQSQPPPLPPPPPPAPGSAPPALPPEGPPEDSSQDLAPNSVGAASTGGGTGG
THPNTPTATTANNPLPPGGDPSSAPGPALLGEAAAPGNGQRSLVGSEGLSKEQLEHRERSLQTLRDIERL
LLRSGETEPFLKGPPGGAGEGGPPAQAPPPPQQPPTAPPSGLKKYEEPLQSMISQTQSLGGPPLEHEVPG
HPPGGDMGQQMNMMIQRLGQDSLTPEQVAWRKLQEEYYEEKRRKEEQIGLHGSRPLQDMMGMGGMMVRGP
PPPYHSKPGDQWPPGMGAQLRGPMDVQDPMQLRGGPPFPGPRFPGNQIQRVPGFGGMQSMPMEVPMNAMQ
RPVRPGMGWTEDLPPMGGPSNFAQNTMPYPGGQGEAERFMTPRVREELLRHQLLEKRSMGMQRPLGMAGS
GMGQSMEMERMMQAHRQMDPAMFPGQMAGGEGLAGTPMGMEFGGGRGLLSPPMGQSGLREVDPPMGPGNL
NMNMNVNMNMNMNLNVQMTPQQQMLMSQKMRGPGDLMGPQGLSPEEMARVRAQNSSGVMGGPQKMLMPSQ
FPNQGQQGFSGGQGPYQAMSQDMGNTQDMFSPDQSSMPMSNVGTTRLSHMPLPPASNPPGTVHSAPNRGL
GRRPSDLTISINQMGSPGMGHLKSPTLSQVHSPLVTSPSANLKSPQTPSQMVPLPSANPPGPLKSPQVLG
SSLSVRSPTGSPSRLKSPSMAVPSPGWVASPKTAMPSPGVSQNKQPPLNMNSSTTLSNMEQGTLPPSGPR
SSSSAPPANPPSGLMNPSLPFTSSPDPTPSQNPLSLMMTQMSKYAMPSSTPLYHNAIKTIATSDDELLPD
RPLLPPPPPPQGSGPGISNSQPSQMHLNSAAAQSPMGMNLPGQQPLSHEPPPAMLPSPTPLGSNIPLHPN
AQGTGGPPQNSMMMAPGGPDSLNAPCGPVPSSSQMMPFPPRLQQPHGAMAPTGGGGGGPGLQQHYPSGMA
LPPEDLPNQPPGPMPPQQHLMGKAMAGRMGDAYPPGVLPGVASVLNDPELSEVIRPTPTGIPEFDLSRII
PSEKPSSTLQYFPKSENQPPKAQPPNLHLMNLQNMMAEQTPSRPPNLPGQQGVQRGLNMSMCHPGQMSLL
GRTGVPPQQGMVPHGLHQGVMSPPQGLMTQQNFMLMKQRGVGGEVYSQPPHMLSPQGSLMGPPPQQNLMV
SHPLRQRSVSLDSQMGYLPAPGGMANLPF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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