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Report for CCDS8466.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8466.1 Public Homo sapiens 11 PUS3 24 110 108 CCDS HistoryNCBI Gene:83480Re-query CCDS DB by CCDS ID:8466.1Re-query CCDS DB by GeneID:83480See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8466.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000227474.8 ENSP00000227474.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000227474.8Link to Ensembl Protein Viewer:ENSP00000227474.3Re-query CCDS DB by Nucleotide ID:ENST00000227474Re-query CCDS DB by Protein ID:ENSP00000227474
Original member Current member EBI ENST00000530811.5 ENSP00000432386.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000530811.5Link to Ensembl Protein Viewer:ENSP00000432386.1Re-query CCDS DB by Nucleotide ID:ENST00000530811Re-query CCDS DB by Protein ID:ENSP00000432386
Original member Current member NCBI NM_031307.4 NP_112597.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031307.4Link to Protein Sequence:NP_112597.4Re-query CCDS DB by Nucleotide ID:NM_031307Re-query CCDS DB by Protein ID:NP_112597Link to BLAST:NP_112597.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_112597.4 481 Q9BZE2 481 100% 0 0

Chromosomal Locations for CCDS 8466.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 125893785 125894286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125895224 125895789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125895907 125896284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1446 nt):
ATGGCTTATAATGACACAGACAGAAACCAGACTGAGAAGCTCCTAAAAAGAGTACGAGAACTGGAGCAAG
AGGTGCAAAGACTTAAAAAGGAACAGGCCAAAAATAAGGAGGACTCAAACATTAGAGAAAATTCAGCAGG
AGCTGGAAAAACTAAGCGTGCATTTGATTTCAGTGCTCATGGCCGAAGACACGTAGCCCTAAGAATAGCC
TATATGGGCTGGGGATACCAGGGCTTTGCTAGTCAGGAAAACACAAATAATACCATTGAAGAGAAACTGT
TTGAAGCTCTAACCAAGACTCGACTAGTAGAAAGCAGACAGACATCCAACTATCACCGATGTGGGAGAAC
AGATAAAGGAGTTAGTGCCTTTGGACAGGTGATCTCACTTGACCTTCGCTCTCAGTTTCCAAGGGGCAGG
GATTCCGAGGACTTTAATGTAAAAGAGGAGGCTAATGCTGCTGCTGAAGAGATCCGTTATACCCACATTC
TCAATCGGGTACTCCCTCCAGACATCCGTATATTGGCCTGGGCCCCTGTAGAACCAAGCTTCAGTGCTAG
GTTCAGCTGCCTTGAGCGGACTTACCGCTATTTTTTCCCTCGTGCTGATTTAGATATTGTAACCATGGAT
TATGCAGCTCAGAAGTATGTTGGCACCCATGATTTCAGGAACTTGTGTAAAATGGATGTAGCCAACGGTG
TGATTAATTTTCAGAGGACTATTCTATCTGCTCAAGTACAGCTAGTGGGCCAGAGCCCAGGTGAGGGGAG
ATGGCAAGAACCTTTCCAGTTATGTCAGTTTGAAGTGACTGGCCAGGCATTCCTTTATCATCAAGTCCGA
TGTATGATGGCTATCCTCTTTCTGATTGGCCAAGGAATGGAGAAGCCAGAGATTATTGATGAGCTGCTGA
ATATAGAGAAAAATCCCCAAAAGCCTCAATATAGTATGGCTGTAGAATTTCCTCTAGTCTTATATGACTG
TAAGTTTGAAAATGTCAAGTGGATCTATGACCAGGAGGCTCAGGAGTTCAATATTACCCACCTACAACAA
CTGTGGGCTAATCATGCTGTCAAAACTCACATGTTGTATAGTATGCTACAAGGACTGGACACTGTTCCAG
TACCCTGTGGAATAGGACCAAAGATGGATGGAATGACAGAATGGGGAAATGTTAAGCCCTCTGTCATAAA
GCAGACCAGTGCCTTTGTAGAAGGAGTGAAGATGCGCACATATAAGCCCCTCATGGACCGTCCTAAATGC
CAAGGACTGGAATCCCGGATCCAGCATTTTGTACGTAGGGGACGAATTGAGCACCCACATTTATTCCATG
AGGAAGAAACAAAAGCCAAAAGGGACTGTAATGACACACTAGAGGAAGAGAATACTAATTTGGAGACACC
AACGAAGAGGGTCTGTGTTGACACAGAAATTAAAAGCATCATTTAA

Translation (481 aa):
MAYNDTDRNQTEKLLKRVRELEQEVQRLKKEQAKNKEDSNIRENSAGAGKTKRAFDFSAHGRRHVALRIA
YMGWGYQGFASQENTNNTIEEKLFEALTKTRLVESRQTSNYHRCGRTDKGVSAFGQVISLDLRSQFPRGR
DSEDFNVKEEANAAAEEIRYTHILNRVLPPDIRILAWAPVEPSFSARFSCLERTYRYFFPRADLDIVTMD
YAAQKYVGTHDFRNLCKMDVANGVINFQRTILSAQVQLVGQSPGEGRWQEPFQLCQFEVTGQAFLYHQVR
CMMAILFLIGQGMEKPEIIDELLNIEKNPQKPQYSMAVEFPLVLYDCKFENVKWIYDQEAQEFNITHLQQ
LWANHAVKTHMLYSMLQGLDTVPVPCGIGPKMDGMTEWGNVKPSVIKQTSAFVEGVKMRTYKPLMDRPKC
QGLESRIQHFVRRGRIEHPHLFHEEETKAKRDCNDTLEEENTNLETPTKRVCVDTEIKSII


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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