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Report for CCDS84705.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84705.1 Public Mus musculus 4 Virma 23 108 98 CCDS HistoryNCBI Gene:66185Re-query CCDS DB by CCDS ID:84705.1Re-query CCDS DB by GeneID:66185See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84705.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000059914.12 ENSMUSP00000058078.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000059914.12Link to Ensembl Protein Viewer:ENSMUSP00000058078.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000059914Re-query CCDS DB by Protein ID:ENSMUSP00000058078
Original member Current member NCBI NM_001347055.1 NP_001333984.1 Accepted alive Link to Nucleotide Sequence:NM_001347055.1Link to Protein Sequence:NP_001333984.1Re-query CCDS DB by Nucleotide ID:NM_001347055Re-query CCDS DB by Protein ID:NP_001333984Link to BLAST:NP_001333984.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001333984.1 1811 A2AIV2-1 1811 100% 0 0

Chromosomal Locations for CCDS 84705.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 11486043 11486105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11494764 11494879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11498740 11498826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11501309 11501357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11505442 11505610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11506954 11507076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11507907 11508179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11513028 11514168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11518926 11519414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11521105 11521259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11522853 11522935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11526347 11526440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11526595 11527139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11527648 11527883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11528538 11528790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11530828 11531045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11534189 11534321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11539910 11540062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11540481 11540641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11542107 11542203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11544831 11544997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11545969 11546300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11548731 11548874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11549545 11549699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5436 nt):
ATGGCGGTGGACTCGTCTATGGAGCTGCTATTTTTAGATACTTTTAAACATCCGAGCGCTGAGCAAAGTT
CTCATATAGATGTGGTTCGTTTTCCGTGTGTGGTTTATATCAATGAAGTCCGAGTTATACCCCCGGGAGT
ACGAGCCCATAGTGGCTTACCTGACAACAGAGCATATGGGGAAACATCTCCTCACACATTTCAACTTGAC
TTATTCTTCAATAATGTAAGCAAACCAAGTGCTCCAGTTTTTGATAGGTTGGGAAGCCTGGAATATGATG
AGAATACGTCTATCATCTTTAGACCAAACTCGAAGGTAAATACTGATGGTCTGGTACTAAGAGGCTGGTA
CAACTGTCTGACCCTGGCAATATATGGATCGGTAGATAGAGTGATAAGCCATGACAGAGACTCTCCACCA
CCTCCACCTCCACCTCCACCTCCTCCCCAGCCACAGCCGACTTTGAAAAGGAATCTAAAGCATGCTGATG
GTGAGAAGGAAGATCAGTTTAATGGAAGTCCTCCAAGACCCCAGCCACGGGGACCAAGAACTCCTCCTGG
ACCTCCTCCACCTGATGACGATGAGGACGACCCTATGTCTTTGCCAGTGTCTGGTGACAAAGAAGAGGAT
GTTCCCCATCGAGAAGATTACTTTGAGCCCATTTCTCCTGATAGGAATTCTGTCCCGCAGGAAGGTCAGT
ATTCCGATGAAGGAGAGGTAGAAGAGGAACCGCAAGAAGAGGGAGAAGATGATGAAGATGATGTGGATGT
AGAGGAAGAAGAGGATGAAGATGAGGATGACTGCCATACAGTAGATAGTATCCCTGATGATGAGGAAGAA
GATGAAGAGGAAGAAGGTGAAGAGGATGAAGAAGGTGAAGGGGACGATGGCTACGAGCAGATCTCTAGTG
ATGAAGATGGAATTGCTGACTTGGAACGTGAAACATTCAAGTATCCAAACTTCGATGTTGAGTATACTCC
AGAAGACCTGGCATCTGTCCCTCCTATGACGTATGACCCGTATGACAGGGAGCTGGCACCACTCTTGTAT
TTCAGCTGTCCATACAAAACTACTTTTGAAATTGAAATCAGTAGAATGAAGGATCAAGGTCCAGATAAAG
AGAATTCAGGGGCAGTAGAAGCCTCGGTGAAGTTAACTGAACTGCTAGACCTGTATCAGGAAGACAGGGG
TGCAAAGTGGGTGACGGCTCTAGAAGAAATTCCAAGTCTAATTATAAAAGGATTAAGCTATTTGCAATTG
AAAAACACAGAACAAGACTCCCTTGGCCAGTTGGTAGACTGGACAATGCAAGCTTTAAATTTACAAGTAG
CCTTTCGACAGCCCATAGCCTTAAATGTCCGACAGCTCAAAGCTGGGACCAAGCTAGTGACCTCATTAGC
AGAATGTGGGGCTCCAGGAGTCACAGAATTGCTACAAGCAGGAGTGATCAATGTATTGTTTGATCTCTTA
TTTGCTGATCATGTCTCATCTTCCCTTAAGTTAAATGCTTTTAAAGCTTTGGACAGTGTCATTAGCATGA
CAGAAGGAATGGAGGCTTTTTTAAGAAGCACCCAAAATGAGAAAAGTGGCTATCAAAGACTTCTGGAACT
CATACTTCTGGATCAGACTGTGAGGGTTGTCACTGCTGGCTCAGCTATTCTTCAAAAATGCCATTTCTAT
GAAATCTTGTCAGAGATTAAAAGACTTGGTGACCACATAGCAGAGAAGACTTCAGCTGTTCCTAACCACA
GTGAGCCTGACCAGGACACAGATGCTGTGCTGGAGAGAGCAAATCCCGATTATGAGAATGAAGTAGAAGC
TTCTATGGACATGGATCTTTTGGAGTCCTCAATTATAAGTGAAGGTGAAATAGAAAAGCTTACTAATCTC
TTAGAGGAGGTTTTTCATGTCATGGAAACTGCACCTCATACAATGACCCAACCTCCTGTCAAGTCTTTCC
CCACAATAGCCCGGATTACCGGGCCTCCAGAGCGGGATGACCCGTACCCTGTCCTCTTTAGGTATCTTCA
CAGCCATCACTTCCTGGAGTTGGTCACCTTGCTTCTGTCGATTCCAATAACAAGTGCCCATCAGGGTGTA
CTGCAAGCCACGAAGGATGTTTTAAAGTTTCTTGCACAGTCACAAAAGGGCCTTCTCTTTTTTATGTCAG
AATATGAAGCGACAAACTTGTTGATCCGAGCTCTGTGCCACCTTTATGATCAAGACGAAGAGGAAGGCCT
TCAGTCTGATGGGGCTGATGATGCCTTTGCCTTGTGGCTGCAGGACTCAACTCAGACTCTGCAGTGCATC
ACAGAGCTGTTCAGCCATTTCCAGCGGTGTACAGCCAGTGAAGAAACTGACCATTCTGATCTCCTGGGCA
CCCTCCACAATCTTTACTTGATTACTTTTAACCCTGTGGGAAGATCAGCTGTTGGCCATGTTTTCAGCCT
TGACAAAAACCTTCAAAGTCTCATTACTCTAATGGAGTACTATTCCAAAGAAGCCCTAGGCGATTCCAAG
TCTAAGAAGTCAGTAGCTTATAATTACGCATGCGTACTCACGCTGGTGGTGGCTCAGTCTTCCAGCGGTG
TCCAGATGTTAGAACAGCACGCAGCATCGCTCTTGAAGCTCTGCAAAGCAGATGAAAATAATGCGAAATT
GCAAGAACTTGGCAAATGGCTTGAACCTCTGAAAAACCTCAGATTTGAAATTAACTGCATCCCAAATCTA
ATTGAATATGTTAAACAGAATATTGATAACTTGATGACTGCAGAAGGAGTTGGCCTTACCACTGCCTTAC
GTGTTCTCTGTAATGTGGCATGTCCACCACCTCCCGTAGAAGGTCAGCAGAAAGACCTGAAATGGAACCT
TGCTGTTATTCAGCTTTTTTCTGCTGAAGGAATGGACACCTTTATTCGGGTTCTGCAAAAACTGAACAGT
ATTTTGACGCAGCCTTGGAGGCTCCATGTGAACATGGGGACTACCCTGCACAGAGTCACTACCATTTCAA
TGGCTCGCTGCACGCTCACTCTGCTTAAAACTATGCTGACAGAGCTCCTGCGAGGCGGATCCTTTGAGTT
TAAGGACATGCGTGTTCCTTCAGCACTTGTTACTTTACACATGCTCCTGTGCTCTATCCCTCTCTCAGGT
CGTTTGGATAGTGATGAGCAGAAAATTCAGAATGATATCATAGATATCTTACTGACTTTTACACAAGGAG
TCAATGAGAAGCTCACGATCTCGGAAGAGACTCTGGCCAATAATACTTGGTCTTTAATGTTAAAGGAAGT
TCTCTCTTCCATCTTGAAGGTTCCGGAAGGCTTCTTCTCAGGACTCATACTCCTTTCAGAGCTGCTGCCT
CTTCCCTTGCCCATGCAGACCACGCAGGTTATTGAGCCACATGATATATCAGTGGCACTCAACACCCGAA
AATTGTGGAGCATGCACCTTCATGTTCAAGCAAAGTTGCTCCAAGAAATAGTTCGTTCTTTCTCTGGCAC
AACCTGCCAGCCCATTCAACATATGTTACGGCGTATTTGTGTTCAATTGTGTGACCTTGCCTCTCCAACT
GCTCTTCTGATCATGAGAACTGTGTTGGATTTGATTGTAGAAGACTTGCAAAGCACTTCAGAAGATAAAG
AAAAACAGTATACTAGCCAAACCACCAGGTTGCTTGCTCTTCTCGATGCCCTGGCTTCACACAAAGCTTG
TAAATTAGCTATTTTGCATCTAATTAATGGAACTATTAAAGGCGATGAAAGATATGCAGAGATCTTCCAG
GATCTTTTAGCTTTGGTGCGCTCTCCTGGGGACAGTGTTACTCGCCAGCAGTGCGTGGAGTATGTCACAT
CCATTTTGCAGTCTCTCTGTGACCAGGACATTGCACTCATTTTGCCAAGCCCTTCTGAAGGTCCTGCCTC
TGAGCTTGAACAGCTCTCTAACTCCCTACCAAGTAAAGAGCTGATGACTGCAATCTGCGACTGTCTGCTG
GCAACTCTAGCCAACTCTGAAAGCAGTTACAACTGTCTGCTGACATGTGTCCGTACAATGATGTTTCTTG
CAGAGCACGATTATGGATTGTTTCACCTGAAAAGCTCTTTAAGGAAGAACAGTAGTGCTCTGCATAGTTT
GCTGAAGCGAGTGGTCAGCACATTCAGTAAGGACACCGGTGAGCTTGCATCGGCGTCTCTGGACTTCATG
AGACAGATCCTCAATGCTGATGCTATGGGCTGTTGTGGAGACGATAGTGGTCTCATGGAGGTAGAGGGCG
CTCACCCACCCCGGACGATGAGTCTTAACGCTGCAGAGTTAAAACAGCTCCTACAGAGCAAAGAAGAGAG
TCCAGAGAGTCTGTTCCTTGAACTAGAGAAGCTTGTTTTGGAACATTCTAAAGATGATGACAGTCTGGAG
TCTTTGCTGGATAATGTAATTGGACTGAAGCAGATGCTGGAGTCATCTGGTGAGCCTTTGCCTCTCAGTG
ACCAAGATGTAGAGCCAGTACTGTCAGCTCCAGAGTCTCTCCAGAATTTATTTAACAACAGGACTGCATA
TGTGTTGGCTGATGTCATGGATGATCAGTTGAAATCTATGTGGTTTACTCCATTTCAGGCTGAAGAGATC
GATACAGACTTGGATTTGGTAAAGGTTGACTTAATTGAGCTTTCAGAAAAGTGCTGCAGTGATTTTGATT
TGCATTCAGAACTAGAGCGCTCGTTTCTGTCAGAACCATCATCTCCAGGAAGATCCAAGACTACTAAGGG
ATTTAAACTCGGGAAGCATAAGCATGAGACATTCATAACTTCAAGTGGAAAATCTGAATACATTGAACCT
GCCAAACGAGCTCATGTTGTGCCGCCACCTAGAGGCCGGGGCCGGGGAGGATTTGGACAGGGCATACGGC
CCCATGATATTTTCCGTCAGAGAAAGCAGAACACGAGCAGGCCGCCATCTATGCACGTGGATGACTTTGT
TGCAGCTGAAAGTAAAGAAGTGGTCCCTCAAGATGGAATACCCCCACCAAAACGGCCACTCAAAGTCTCA
CAAAAGATTTCCTCTCGTGGTGGATTTTCAGGCAACCGAGGAGGACGGGGTGCTTTTCATAGTCAGAACA
GGTTTTTCACACCGCCTGCTTCGAAAGGAAACTACAGTCGTCGGGAAGGAACAAGAGGCTCGAGTTGGAG
TGCTCAGAACACTCCTCGAGGAAATTATAATGAAAGCCGAGGGGGCCAGAGCAACTTTAACAGGGGTCCT
CTTCCACCATTACGGCCGCTTAGTTCTACGGGTTACCGCCCTAGTCCCCGGGATCGAGCTTCTAGAGGCC
GCGGGGGCCTGGGACCGTCCTGGGCTAGTACAAATAGCGGCAGTGGAGGCTCGAGAGGAAAGTTTGTTAG
TGGAGGCAGTGGTAGAGGCCGTCATGTACGGTCCTTTACTCGATAG

Translation (1811 aa):
MAVDSSMELLFLDTFKHPSAEQSSHIDVVRFPCVVYINEVRVIPPGVRAHSGLPDNRAYGETSPHTFQLD
LFFNNVSKPSAPVFDRLGSLEYDENTSIIFRPNSKVNTDGLVLRGWYNCLTLAIYGSVDRVISHDRDSPP
PPPPPPPPPQPQPTLKRNLKHADGEKEDQFNGSPPRPQPRGPRTPPGPPPPDDDEDDPMSLPVSGDKEED
VPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEPQEEGEDDEDDVDVEEEEDEDEDDCHTVDSIPDDEEE
DEEEEGEEDEEGEGDDGYEQISSDEDGIADLERETFKYPNFDVEYTPEDLASVPPMTYDPYDRELAPLLY
FSCPYKTTFEIEISRMKDQGPDKENSGAVEASVKLTELLDLYQEDRGAKWVTALEEIPSLIIKGLSYLQL
KNTEQDSLGQLVDWTMQALNLQVAFRQPIALNVRQLKAGTKLVTSLAECGAPGVTELLQAGVINVLFDLL
FADHVSSSLKLNAFKALDSVISMTEGMEAFLRSTQNEKSGYQRLLELILLDQTVRVVTAGSAILQKCHFY
EILSEIKRLGDHIAEKTSAVPNHSEPDQDTDAVLERANPDYENEVEASMDMDLLESSIISEGEIEKLTNL
LEEVFHVMETAPHTMTQPPVKSFPTIARITGPPERDDPYPVLFRYLHSHHFLELVTLLLSIPITSAHQGV
LQATKDVLKFLAQSQKGLLFFMSEYEATNLLIRALCHLYDQDEEEGLQSDGADDAFALWLQDSTQTLQCI
TELFSHFQRCTASEETDHSDLLGTLHNLYLITFNPVGRSAVGHVFSLDKNLQSLITLMEYYSKEALGDSK
SKKSVAYNYACVLTLVVAQSSSGVQMLEQHAASLLKLCKADENNAKLQELGKWLEPLKNLRFEINCIPNL
IEYVKQNIDNLMTAEGVGLTTALRVLCNVACPPPPVEGQQKDLKWNLAVIQLFSAEGMDTFIRVLQKLNS
ILTQPWRLHVNMGTTLHRVTTISMARCTLTLLKTMLTELLRGGSFEFKDMRVPSALVTLHMLLCSIPLSG
RLDSDEQKIQNDIIDILLTFTQGVNEKLTISEETLANNTWSLMLKEVLSSILKVPEGFFSGLILLSELLP
LPLPMQTTQVIEPHDISVALNTRKLWSMHLHVQAKLLQEIVRSFSGTTCQPIQHMLRRICVQLCDLASPT
ALLIMRTVLDLIVEDLQSTSEDKEKQYTSQTTRLLALLDALASHKACKLAILHLINGTIKGDERYAEIFQ
DLLALVRSPGDSVTRQQCVEYVTSILQSLCDQDIALILPSPSEGPASELEQLSNSLPSKELMTAICDCLL
ATLANSESSYNCLLTCVRTMMFLAEHDYGLFHLKSSLRKNSSALHSLLKRVVSTFSKDTGELASASLDFM
RQILNADAMGCCGDDSGLMEVEGAHPPRTMSLNAAELKQLLQSKEESPESLFLELEKLVLEHSKDDDSLE
SLLDNVIGLKQMLESSGEPLPLSDQDVEPVLSAPESLQNLFNNRTAYVLADVMDDQLKSMWFTPFQAEEI
DTDLDLVKVDLIELSEKCCSDFDLHSELERSFLSEPSSPGRSKTTKGFKLGKHKHETFITSSGKSEYIEP
AKRAHVVPPPRGRGRGGFGQGIRPHDIFRQRKQNTSRPPSMHVDDFVAAESKEVVPQDGIPPPKRPLKVS
QKISSRGGFSGNRGGRGAFHSQNRFFTPPASKGNYSRREGTRGSSWSAQNTPRGNYNESRGGQSNFNRGP
LPPLRPLSSTGYRPSPRDRASRGRGGLGPSWASTNSGSGGSRGKFVSGGSGRGRHVRSFTR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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