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Report for CCDS8482.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8482.1 Public Homo sapiens 11 TMEM45B 24 110 108 CCDS HistoryNCBI Gene:120224Re-query CCDS DB by CCDS ID:8482.1Re-query CCDS DB by GeneID:120224See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8482.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000281441.8 ENSP00000281441.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000281441.8Link to Ensembl Protein Viewer:ENSP00000281441.3Re-query CCDS DB by Nucleotide ID:ENST00000281441Re-query CCDS DB by Protein ID:ENSP00000281441
Original member Current member EBI ENST00000524567.1 ENSP00000436293.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000524567.1Link to Ensembl Protein Viewer:ENSP00000436293.1Re-query CCDS DB by Nucleotide ID:ENST00000524567Re-query CCDS DB by Protein ID:ENSP00000436293
Original member Current member NCBI NM_001331210.2 NP_001318139.1 Accepted alive Link to Nucleotide Sequence:NM_001331210.2Link to Protein Sequence:NP_001318139.1Re-query CCDS DB by Nucleotide ID:NM_001331210Re-query CCDS DB by Protein ID:NP_001318139Link to BLAST:NP_001318139.1
Original member Current member NCBI NM_001331211.2 NP_001318140.1 Accepted alive Link to Nucleotide Sequence:NM_001331211.2Link to Protein Sequence:NP_001318140.1Re-query CCDS DB by Nucleotide ID:NM_001331211Re-query CCDS DB by Protein ID:NP_001318140Link to BLAST:NP_001318140.1
Original member Current member NCBI NM_001331212.2 NP_001318141.1 Accepted alive Link to Nucleotide Sequence:NM_001331212.2Link to Protein Sequence:NP_001318141.1Re-query CCDS DB by Nucleotide ID:NM_001331212Re-query CCDS DB by Protein ID:NP_001318141Link to BLAST:NP_001318141.1
Original member Current member NCBI NM_138788.5 NP_620143.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138788.5Link to Protein Sequence:NP_620143.1Re-query CCDS DB by Nucleotide ID:NM_138788Re-query CCDS DB by Protein ID:NP_620143Link to BLAST:NP_620143.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001318139.1 275 Q96B21 275 100% 0 0
NP_001318140.1 275 Q96B21 275 100% 0 0
NP_001318141.1 275 Q96B21 275 100% 0 0
NP_620143.1 275 Q96B21 275 100% 0 0

Chromosomal Locations for CCDS 8482.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 129852483 129852660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 129854610 129854816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 129855708 129855892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 129857313 129857458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 129858574 129858685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (828 nt):
ATGGCAAATTTCAAGGGCCACGCGCTTCCAGGGAGTTTCTTCCTGATCATTGGGCTGTGTTGGTCAGTGA
AGTACCCGCTGAAGTACTTTAGCCACACGCGGAAGAACAGCCCACTACATTACTATCAGCGTCTCGAGAT
CGTCGAAGCCGCAATTAGGACTTTGTTTTCCGTCACTGGGATCCTGGCAGAGCAGTTTGTTCCGGATGGG
CCCCACCTGCACCTCTACCATGAGAACCACTGGATAAAGTTAATGAATTGGCAGCACAGCACCATGTACC
TATTCTTTGCAGTCTCAGGAATTGTTGACATGCTCACCTATCTGGTCAGCCACGTTCCCTTGGGGGTGGA
CAGACTGGTTATGGCTGTGGCAGTATTCATGGAAGGTTTCCTCTTCTACTACCACGTCCACAACCGGCCT
CCGCTGGACCAGCACATCCACTCACTCCTGCTGTATGCTCTGTTCGGAGGGTGTGTTAGTATCTCCCTAG
AGGTGATCTTCCGGGACCACATTGTGCTGGAACTTTTCCGAACCAGTCTCATCATTCTTCAGGGAACCTG
GTTCTGGCAGATTGGGTTTGTGCTGTTCCCACCTTTTGGAACACCCGAATGGGACCAGAAGGATGATGCC
AACCTCATGTTCATCACCATGTGCTTCTGCTGGCACTACCTGGCTGCCCTCAGCATTGTGGCCGTCAACT
ATTCTCTTGTTTACTGCCTTTTGACTCGGATGAAGAGACACGGAAGGGGAGAAATCATTGGAATTCAGAA
GCTGAATTCAGATGACACTTACCAGACCGCCCTCTTGAGTGGCTCAGATGAGGAATGA

Translation (275 aa):
MANFKGHALPGSFFLIIGLCWSVKYPLKYFSHTRKNSPLHYYQRLEIVEAAIRTLFSVTGILAEQFVPDG
PHLHLYHENHWIKLMNWQHSTMYLFFAVSGIVDMLTYLVSHVPLGVDRLVMAVAVFMEGFLFYYHVHNRP
PLDQHIHSLLLYALFGGCVSISLEVIFRDHIVLELFRTSLIILQGTWFWQIGFVLFPPFGTPEWDQKDDA
NLMFITMCFCWHYLAALSIVAVNYSLVYCLLTRMKRHGRGEIIGIQKLNSDDTYQTALLSGSDEE


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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