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Report for CCDS85155.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85155.1 Public Mus musculus 6 Mfap5 23 108 98 CCDS HistoryNCBI Gene:50530Re-query CCDS DB by CCDS ID:85155.1Re-query CCDS DB by GeneID:50530See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85155.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000032210.13 ENSMUSP00000032210.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032210.13Link to Ensembl Protein Viewer:ENSMUSP00000032210.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000032210Re-query CCDS DB by Protein ID:ENSMUSP00000032210
Original member Current member NCBI NM_001347434.1 NP_001334363.1 Accepted alive Link to Nucleotide Sequence:NM_001347434.1Link to Protein Sequence:NP_001334363.1Re-query CCDS DB by Nucleotide ID:NM_001347434Re-query CCDS DB by Protein ID:NP_001334363Link to BLAST:NP_001334363.1

Chromosomal Locations for CCDS 85155.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 122514343 122514400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 122515348 122515383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 122520579 122520611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 122520896 122520928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 122524487 122524510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 122525951 122526038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 122526787 122526860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 122528319 122528431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (459 nt):
ATGCTGTTCTTGGGGCAGAAGGCCTTGCTGCTTGTCTTGGCAATCAGCATCCCCTCTGACTGGCTACCCC
TAGGGGTCAGTGGTCAACGCGGAGATGATGTGCCTGAGACATTCACAGACGACCCTAATCTGGTGAACGA
TCCCTCTACAGACGATACAGCTGGTGACAAAAATGCTACTGCAGAGTGCCGGGATGAGAAGTTTGCTTGT
ACAAGACTGTACTCTGTCCATCGGCCAGTCAGACAGTGTGTGCACCAGTCCTGCTTCACCAGTTTACGGC
GCATGTACATCATCAATAATGAGATCTGTTCCCGACTCGTCTGTAAAGAACATGAAGCTATGAAAGATGA
GCTTTGCCGGCAGATGGCAGGCCTGCCTCCAAGGCGACTTCGGCGCTCCAACTACTTCCGACTTCCTCCC
TGTGAAAATATGAATTTGCAGAGACCCGATGGTCTGTGA

Translation (152 aa):
MLFLGQKALLLVLAISIPSDWLPLGVSGQRGDDVPETFTDDPNLVNDPSTDDTAGDKNATAECRDEKFAC
TRLYSVHRPVRQCVHQSCFTSLRRMYIINNEICSRLVCKEHEAMKDELCRQMAGLPPRRLRRSNYFRLPP
CENMNLQRPDGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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