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Report for CCDS85468.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85468.1 Public Mus musculus 7 Ifitm10 23 108 98 CCDS HistoryNCBI Gene:320802Re-query CCDS DB by CCDS ID:85468.1Re-query CCDS DB by GeneID:320802See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85468.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000105988.1 ENSMUSP00000101608.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000105988.1Link to Ensembl Protein Viewer:ENSMUSP00000101608.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000105988Re-query CCDS DB by Protein ID:ENSMUSP00000101608
Original member NCBI NM_001347541.1 NP_001334470.1 Updated not alive Link to Nucleotide Sequence:NM_001347541.1Link to Protein Sequence:NP_001334470.1Re-query CCDS DB by Nucleotide ID:NM_001347541Re-query CCDS DB by Protein ID:NP_001334470
Current member NCBI NM_001347541.2 NP_001334470.1 Accepted alive Link to Nucleotide Sequence:NM_001347541.2Link to Protein Sequence:NP_001334470.1Re-query CCDS DB by Nucleotide ID:NM_001347541Re-query CCDS DB by Protein ID:NP_001334470Link to BLAST:NP_001334470.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001334470.1 201 Q8BR26-1 201 100% 0 0

Chromosomal Locations for CCDS 85468.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 142355965 142356114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 142370858 142371310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 142373576 142373578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (606 nt):
ATGGCTCAGGGCCCCAGCCAGTGCCCAGCCCTGCTGGGAGCCCCGGCTAGCACCACGGACGGCACCCAGG
AAGCCCGAGTCCCCTTGGACGGGGCCTTCTGGATTCCCAGGCCACCAGCAGGTTCACCCAAGGGCTGCTT
CGCCTGTGTGTCCAAGCCTCCTGCCCTGCAGGCTGCAGCGGCTCCAGCTCCTGAGCCTTCGGCCTCACCC
CCCATGGCACCCACTCTGTTTCCTATGGAGTCTAAAAGCAGCAAGACTGACAGCGTTCGGGCATCGGGTG
TCCCGCAAGCCTGCAAGCACTTAGCTGAGAAGAAGACGATGACGAACCCCACCACAGTCATCGAGGTCTA
CCCGGACACTACGGAGGTGAACGACTACTATCTGTGGTCCATCTTCAACTTCGTCTACCTCAACTTCTGT
TGCCTGGGCTTCATTGCTCTGGCCTACTCCCTCAAAGTTCGGGACAAGAAGCTCTTGAATGACCTGAATG
GAGCTGTGGAGGATGCCAAGACAGCACGGCTGTTTAACATCACCAGTTCTGCTCTGGCAGCCTCCTGCAT
CATCCTTATCTTCATTTTCCTGCGGTACCCACTCACTGACTACTGA

Translation (201 aa):
MAQGPSQCPALLGAPASTTDGTQEARVPLDGAFWIPRPPAGSPKGCFACVSKPPALQAAAAPAPEPSASP
PMAPTLFPMESKSSKTDSVRASGVPQACKHLAEKKTMTNPTTVIEVYPDTTEVNDYYLWSIFNFVYLNFC
CLGFIALAYSLKVRDKKLLNDLNGAVEDAKTARLFNITSSALAASCIILIFIFLRYPLTDY


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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