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Report for CCDS8571.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8571.1 Public Homo sapiens 12 C12orf57 24 110 108 CCDS HistoryNCBI Gene:113246Re-query CCDS DB by CCDS ID:8571.1Re-query CCDS DB by GeneID:113246See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8571.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000229281.6 ENSP00000229281.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000229281.6Link to Ensembl Protein Viewer:ENSP00000229281.5Re-query CCDS DB by Nucleotide ID:ENST00000229281Re-query CCDS DB by Protein ID:ENSP00000229281
Original member Current member NCBI NM_001301834.1 NP_001288763.1 Accepted alive Link to Nucleotide Sequence:NM_001301834.1Link to Protein Sequence:NP_001288763.1Re-query CCDS DB by Nucleotide ID:NM_001301834Re-query CCDS DB by Protein ID:NP_001288763Link to BLAST:NP_001288763.1
Original member Current member NCBI NM_138425.4 NP_612434.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138425.4Link to Protein Sequence:NP_612434.1Re-query CCDS DB by Nucleotide ID:NM_138425Re-query CCDS DB by Protein ID:NP_612434Link to BLAST:NP_612434.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001288763.1 126 Q99622 126 100% 0 0
NP_612434.1 126 Q99622 126 100% 0 0

Chromosomal Locations for CCDS 8571.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 6944122 6944173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6944476 6944652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6945771 6945922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (381 nt):
ATGGCGTCCGCCTCGACCCAACCGGCGGCCTTGAGCGCTGAGCAAGCAAAGGTGGTCCTCGCGGAGGTGA
TCCAGGCGTTCTCCGCCCCGGAGAATGCAGTGCGCATGGACGAGGCTCGGGATAACGCCTGCAACGACAT
GGGTAAGATGCTGCAATTCGTGCTGCCCGTGGCCACGCAGATCCAGCAGGAGGTTATCAAAGCCTATGGC
TTCAGCTGCGACGGGGAAGGTGTCCTTAAGTTTGCTCGCTTGGTCAAGTCCTACGAAGCCCAGGATCCTG
AGATCGCCAGCCTGTCAGGCAAGCTGAAGGCGCTGTTTCTGCCGCCCATGACCCTGCCACCCCATGGGCC
TGCTGCTGGTGGCAGCGTGGCCGCCTCCTGA

Translation (126 aa):
MASASTQPAALSAEQAKVVLAEVIQAFSAPENAVRMDEARDNACNDMGKMLQFVLPVATQIQQEVIKAYG
FSCDGEGVLKFARLVKSYEAQDPEIASLSGKLKALFLPPMTLPPHGPAAGGSVAAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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