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Report for CCDS85778.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85778.1 Public Mus musculus X Atp2b3 23 108 98 CCDS HistoryNCBI Gene:320707Re-query CCDS DB by CCDS ID:85778.1Re-query CCDS DB by GeneID:320707See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85778.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033744.11 ENSMUSP00000033744.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033744.11Link to Ensembl Protein Viewer:ENSMUSP00000033744.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000033744Re-query CCDS DB by Protein ID:ENSMUSP00000033744
Original member Current member NCBI NM_001310537.1 NP_001297466.1 Accepted alive Link to Nucleotide Sequence:NM_001310537.1Link to Protein Sequence:NP_001297466.1Re-query CCDS DB by Nucleotide ID:NM_001310537Re-query CCDS DB by Protein ID:NP_001297466Link to BLAST:NP_001297466.1

Chromosomal Locations for CCDS 85778.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 73522955 73523162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73528645 73528842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73528942 73529199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73529626 73529751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73530297 73530422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73533885 73533926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73535356 73535520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73536132 73536346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73536885 73537127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73538076 73538317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73542186 73542420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73545063 73545242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73545365 73545452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73546460 73546566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73547643 73547834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73550952 73551165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73551454 73551665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73552800 73552907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73555053 73555235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73558032 73558124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3435 nt):
ATGGGCGACATGGCAAACAGTTCCATTGAGTTCCACCCCAAGCCCCAGCAGCAGCGGGAAGTGCCCCATG
TGGGTGGCTTTGGATGCACACTGGCAGAACTACGAAGCCTCATGGAGCTCCGAGGTGCTGAGGCACTGCA
GAAGATTCAAGAAGCCTATGGGGATGTCAGCGGGCTGTGCAGGAGGCTGAAGACCTCACCTACTGAGGGC
CTGGCAGACAACACCAATGACTTGGAGAAACGCAGGCAGATCTATGGGCAGAACTTCATCCCCCCAAAGC
AGCCTAAGACCTTCCTGCAACTGGTGTGGGAAGCCCTGCAGGACGTGACTCTCATCATCCTGGAGGTGGC
TGCTATCGTCTCCCTGGGCCTCTCCTTCTATGCACCTCCTGGAGAGGAAAGTGAAGCCTGTGGGAATGTG
TCTGGTGGGGCAGAGGATGAAGGAGAGGCTGAAGCTGGCTGGATTGAGGGGGCTGCCATCCTACTCTCTG
TCATCTGTGTGGTGCTGGTCACAGCCTTCAATGACTGGAGCAAGGAAAAGCAGTTCCGAGGTCTTCAAAG
CCGTATTGAGCAGGAGCAGAAGTTTACTGTCATACGAAATGGGCAGCTCCTCCAGGTCCCTGTGGCGGCC
CTGGTGGTAGGGGACATTGCCCAGGTCAAATATGGAGATCTTCTGCCTGCCGATGGTGTGCTCATCCAAG
GCAATGACCTCAAGATCGATGAGAGCTCCCTGACCGGCGAGTCGGACCATGTTCGAAAATCAGCAGACAA
AGATCCTATGCTGCTCTCAGGAACTCATGTCATGGAAGGTTCTGGGAGAATGGTGGTAACAGCTGTTGGT
GTGAACTCCCAGACAGGCATCATCTTTACATTGCTTGGGGCAGGTGGAGAGGAGGAGGAGAAGAAAGACA
AGAAAGGCAAGCAGCAGGATGGGGCGATGGACAGTAGCCAAACCAGAGCTAAGAAGCAGGATGGGGCTGT
TGCCATGGAAATGCAACCCCTGAAGAGCGCCGAGGGTGGGGAAATGGAGGAGCGGGAAAAGAAGAAAGCC
AACGTACCCAAGAAGGAGAAGTCAGTCCTGCAAGGAAAGCTCACAAAACTGGCTGTGCAGATTGGGAAAG
CAGGATTGGTGATGTCTGCTATCACTGTCATCATTCTGGTCCTCTACTTTGTGATTGAGACCTTTGTCGT
GGATGGCCGGGTATGGCTGGCAGAGTGCACACCAGTGTATGTGCAGTACTTCGTGAAGTTCTTCATTATT
GGAGTCACTGTTTTGGTTGTGGCTGTCCCTGAGGGCCTGCCTCTTGCTGTTACTATCTCCTTGGCTTATT
CTGTCAAGAAAATGATGAAGGATAATAACCTGGTACGCCACCTGGATGCCTGTGAGACCATGGGCAATGC
CACAGCCATCTGTTCTGACAAGACGGGCACACTCACCACCAACCGCATGACAGTGGTCCAGTCCTACCTA
GGAGACACCCACTACAAAGAGATTCCAGCTCCCAGCGCCCTGACCCCCAAGATTCTTGACCTTCTGGTTC
ACGCCATCTCCATCAACAGTGCCTACACCACCAAAATTCTACCTCCAGAGAAAGAAGGCGCTCTCCCACG
CCAAGTGGGCAACAAAACAGAGTGTGCTCTGCTGGGCTTCGTCTTGGACCTGAAACGTGACTTCCAGCCA
GTACGGGAGCAGATACCAGAAGATCAGCTTTACAAAGTGTACACCTTCAACTCAGTTCGCAAGTCTATGA
GCACAGTTATCCGCATGCCTGATGGTGGCTTCCGCCTCTTTAGCAAGGGAGCCTCAGAGATTCTGCTCAA
AAAGTGTACAAACATCTTAAACAGCAATGGTGAACTCCGAGGATTTCGTCCTCGGGACCGGGATGATATG
GTGAAGAAGATCATTGAGCCTATGGCTTGTGATGGCCTCCGCACCATCTGCATTGCCTACAGGGACTTCT
CTGCTATCCAGGAGCCTGATTGGGACAATGAGAATGAGGTGGTTGGTGACCTTACCTGCATAGCTGTTGT
GGGCATCGAGGACCCTGTGCGACCTGAGGTCCCTGAAGCCATTCGAAAATGCCAGCGTGCTGGCATCACA
GTCCGTATGGTGACTGGAGACAACATCAACACTGCCCGGGCTATTGCAGCTAAGTGTGGCATCATCCAGC
CAGGAGAGGACTTCCTGTGCCTGGAGGGGAAGGAATTCAACAGAAGAATTCGAAATGAGAAAGGCGAGAT
TGAACAGGAGCGGCTGGACAAAGTGTGGCCCAAGCTGCGGGTGCTTGCCCGGTCATCTCCCACTGATAAA
CATACTCTGGTTAAAGGCATTATTGACAGCACAACTGGTGAGCAGCGGCAGGTGGTGGCTGTGACTGGAG
ATGGCACCAATGATGGGCCAGCCCTCAAAAAGGCAGATGTGGGCTTCGCCATGGGCATTGCAGGCACTGA
TGTGGCCAAGGAGGCCTCTGACATCATTCTGACTGATGACAACTTCACCAGCATTGTCAAGGCGGTCATG
TGGGGCCGCAATGTCTATGACAGCATCTCCAAGTTCCTGCAGTTTCAGTTGACAGTCAACGTGGTAGCTG
TGATCGTGGCCTTCACGGGTGCCTGCATTACTCAGGACTCTCCTCTCAAAGCTGTGCAGATGTTGTGGGT
GAACTTAATCATGGACACATTTGCCTCACTTGCCCTGGCAACGGAACCCCCAACTGAGTCACTGCTGCTG
CGGAAGCCATACGGCCGGGACAAGCCTCTCATCTCGAGAACCATGATGAAGAACATCCTTGGACATGCTG
TCTACCAGCTCACCATCATCTTTACCCTGCTATTTGTTGGGGAGCTTTTCTTTGACATTGACAGTGGAAG
AAATGCACCTCTGCACTCACCACCGTCAGAGCACTATACCATCATCTTCAACACGTTCGTCATGATGCAG
CTTTTCAATGAGATCAATGCTCGCAAGATCCATGGTGAGAGGAATGTCTTTGATGGCATCTTCAGCAACC
CCATCTTCTGCACCATTGTCTTGGGCACCTTTGGAATTCAGATTGTCATTGTCCAATTTGGAGGGAAGCC
CTTCAGCTGTTCCCCACTGTCCACAGAACAGTGGCTTTGGTGCCTGTTTGTTGGTGTTGGGGAGCTGGTC
TGGGGACAGGTCATTGCCACCATCCCCACCAGCCAGCTCAAGTGCCTGAAGGAAGCAGGGCATGGGCCTG
GGAAGGATGAGATGACTGATGAAGAGCTGGCCGAAGGGGAAGAAGAAATTGACCATGCTGAACGAGAGCT
CCGCAGGGGCCAGATCCTCTGGTTTCGGGGCCTCAACCGGATCCAGACACAGGCAACTGGCCCGATTTCT
GGATCTTGTGAACCACAAAATTGCTCTCCGGATTTCGGAGGCCTGTACAACATTTTCTGTTGCATAGTAA
CTTGA

Translation (1144 aa):
MGDMANSSIEFHPKPQQQREVPHVGGFGCTLAELRSLMELRGAEALQKIQEAYGDVSGLCRRLKTSPTEG
LADNTNDLEKRRQIYGQNFIPPKQPKTFLQLVWEALQDVTLIILEVAAIVSLGLSFYAPPGEESEACGNV
SGGAEDEGEAEAGWIEGAAILLSVICVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVIRNGQLLQVPVAA
LVVGDIAQVKYGDLLPADGVLIQGNDLKIDESSLTGESDHVRKSADKDPMLLSGTHVMEGSGRMVVTAVG
VNSQTGIIFTLLGAGGEEEEKKDKKGKQQDGAMDSSQTRAKKQDGAVAMEMQPLKSAEGGEMEEREKKKA
NVPKKEKSVLQGKLTKLAVQIGKAGLVMSAITVIILVLYFVIETFVVDGRVWLAECTPVYVQYFVKFFII
GVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYL
GDTHYKEIPAPSALTPKILDLLVHAISINSAYTTKILPPEKEGALPRQVGNKTECALLGFVLDLKRDFQP
VREQIPEDQLYKVYTFNSVRKSMSTVIRMPDGGFRLFSKGASEILLKKCTNILNSNGELRGFRPRDRDDM
VKKIIEPMACDGLRTICIAYRDFSAIQEPDWDNENEVVGDLTCIAVVGIEDPVRPEVPEAIRKCQRAGIT
VRMVTGDNINTARAIAAKCGIIQPGEDFLCLEGKEFNRRIRNEKGEIEQERLDKVWPKLRVLARSSPTDK
HTLVKGIIDSTTGEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVM
WGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLL
RKPYGRDKPLISRTMMKNILGHAVYQLTIIFTLLFVGELFFDIDSGRNAPLHSPPSEHYTIIFNTFVMMQ
LFNEINARKIHGERNVFDGIFSNPIFCTIVLGTFGIQIVIVQFGGKPFSCSPLSTEQWLWCLFVGVGELV
WGQVIATIPTSQLKCLKEAGHGPGKDEMTDEELAEGEEEIDHAERELRRGQILWFRGLNRIQTQATGPIS
GSCEPQNCSPDFGGLYNIFCCIVT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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