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Report for CCDS8621.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8621.1 Public Homo sapiens 12 KLRD1 24 110 108 CCDS HistoryNCBI Gene:3824Re-query CCDS DB by CCDS ID:8621.1Re-query CCDS DB by GeneID:3824See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8621.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000336164.9 ENSP00000338130.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000336164.9Link to Ensembl Protein Viewer:ENSP00000338130.4Re-query CCDS DB by Nucleotide ID:ENST00000336164Re-query CCDS DB by Protein ID:ENSP00000338130
Original member Current member EBI ENST00000381908.7 ENSP00000371333.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000381908.7Link to Ensembl Protein Viewer:ENSP00000371333.4Re-query CCDS DB by Nucleotide ID:ENST00000381908Re-query CCDS DB by Protein ID:ENSP00000371333
Original member Current member NCBI NM_001114396.3 NP_001107868.2 Accepted alive Link to Nucleotide Sequence:NM_001114396.3Link to Protein Sequence:NP_001107868.2Re-query CCDS DB by Nucleotide ID:NM_001114396Re-query CCDS DB by Protein ID:NP_001107868Link to BLAST:NP_001107868.2
Original member Current member NCBI NM_001351062.2 NP_001337991.1 Accepted alive Link to Nucleotide Sequence:NM_001351062.2Link to Protein Sequence:NP_001337991.1Re-query CCDS DB by Nucleotide ID:NM_001351062Re-query CCDS DB by Protein ID:NP_001337991Link to BLAST:NP_001337991.1
Original member Current member NCBI NM_002262.5 NP_002253.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002262.5Link to Protein Sequence:NP_002253.2Re-query CCDS DB by Nucleotide ID:NM_002262Re-query CCDS DB by Protein ID:NP_002253Link to BLAST:NP_002253.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001107868.2 179 Q13241-1 179 100% 0 0
NP_001337991.1 179 Q13241-1 179 100% 0 0
NP_002253.2 179 Q13241-1 179 100% 0 0

Chromosomal Locations for CCDS 8621.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 10308078 10308084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 10309388 10309480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 10309626 10309688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 10311464 10311615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 10313410 10313513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 10314673 10314793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (540 nt):
ATGGCAGTGTTTAAGACCACTCTGTGGAGGTTAATTTCTGGGACCTTAGGGATAATATGCCTTTCGTTGA
TGTCTACGTTGGGAATTTTGTTGAAAAATTCTTTTACTAAACTGAGTATTGAGCCAGCATTTACTCCAGG
ACCCAACATAGAACTCCAGAAAGACTCTGACTGCTGTTCTTGCCAAGAAAAATGGGTTGGGTACCGGTGC
AACTGTTACTTCATTTCCAGTGAACAGAAAACTTGGAACGAAAGTCGGCATCTCTGTGCTTCTCAGAAAT
CCAGCCTGCTTCAGCTTCAAAACACAGATGAACTGGATTTTATGAGCTCCAGTCAACAATTTTACTGGAT
TGGACTCTCTTACAGTGAGGAGCACACCGCCTGGTTGTGGGAGAATGGCTCTGCACTCTCCCAGTATCTA
TTTCCATCATTTGAAACTTTTAATACAAAGAACTGCATAGCGTATAATCCAAATGGAAATGCTTTAGATG
AATCCTGTGAAGATAAAAATCGTTATATCTGTAAGCAACAGCTCATTTAA

Translation (179 aa):
MAVFKTTLWRLISGTLGIICLSLMSTLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCSCQEKWVGYRC
NCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYL
FPSFETFNTKNCIAYNPNGNALDESCEDKNRYICKQQLI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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