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Report for CCDS86377.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86377.1 Public Homo sapiens 14 EMC9 24 110 108 CCDS HistoryNCBI Gene:51016Re-query CCDS DB by CCDS ID:86377.1Re-query CCDS DB by GeneID:51016See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86377.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000560403.5 ENSP00000454016.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000560403.5Link to Ensembl Protein Viewer:ENSP00000454016.1Re-query CCDS DB by Nucleotide ID:ENST00000560403Re-query CCDS DB by Protein ID:ENSP00000454016
Original member Current member NCBI NM_001346874.2 NP_001333803.1 Accepted alive Link to Nucleotide Sequence:NM_001346874.2Link to Protein Sequence:NP_001333803.1Re-query CCDS DB by Nucleotide ID:NM_001346874Re-query CCDS DB by Protein ID:NP_001333803Link to BLAST:NP_001333803.1
Original member Current member NCBI NM_001346875.2 NP_001333804.1 Accepted alive Link to Nucleotide Sequence:NM_001346875.2Link to Protein Sequence:NP_001333804.1Re-query CCDS DB by Nucleotide ID:NM_001346875Re-query CCDS DB by Protein ID:NP_001333804Link to BLAST:NP_001333804.1
Original member Current member NCBI NM_001346876.2 NP_001333805.1 Accepted alive Link to Nucleotide Sequence:NM_001346876.2Link to Protein Sequence:NP_001333805.1Re-query CCDS DB by Nucleotide ID:NM_001346876Re-query CCDS DB by Protein ID:NP_001333805Link to BLAST:NP_001333805.1
Original member Current member NCBI NM_001346877.2 NP_001333806.1 Accepted alive Link to Nucleotide Sequence:NM_001346877.2Link to Protein Sequence:NP_001333806.1Re-query CCDS DB by Nucleotide ID:NM_001346877Re-query CCDS DB by Protein ID:NP_001333806Link to BLAST:NP_001333806.1

Chromosomal Locations for CCDS 86377.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 24139010 24139196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24139360 24139454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24139545 24139667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (405 nt):
ATGGGTTTTGCCCACAGTTGGCTCCTCACTCCTCTGATCTTCCCTCTACACAGCCCTGGGCCCCTGGCCT
TGAAAATTGCTGGGCGAATTGCAGAATTCTTCCCTGATGCAGTACTTATTATGTTGGATAATCAGAAACT
GGTGCCTCAGCCTCGTGTGCCCCCGGTCATCGTCCTGGAGAACCAAGGTCTCCGCTGGGTCCCTAAGGAT
AAGAACTTAGTGATGTGGAGGGACTGGGAAGAGTCACGGCAGATGGTGGGAGCTCTACTGGAAGATCGGG
CCCACCAGCACCTTGTGGACTTTGACTGCCACCTTGATGACATCCGGCAGGACTGGACCAACCAGCGGCT
CAACACTCAAATCACCCAGTGGGTTGGTCCCACTAATGGAAATGGAAATGCCTGA

Translation (134 aa):
MGFAHSWLLTPLIFPLHSPGPLALKIAGRIAEFFPDAVLIMLDNQKLVPQPRVPPVIVLENQGLRWVPKD
KNLVMWRDWEESRQMVGALLEDRAHQHLVDFDCHLDDIRQDWTNQRLNTQITQWVGPTNGNGNA


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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