NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS86418.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86418.1 Public Homo sapiens 14 ZC3H14 24 110 108 CCDS HistoryNCBI Gene:79882Re-query CCDS DB by CCDS ID:86418.1Re-query CCDS DB by GeneID:79882See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86418.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393514.9 ENSP00000377150.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393514.9Link to Ensembl Protein Viewer:ENSP00000377150.5Re-query CCDS DB by Nucleotide ID:ENST00000393514Re-query CCDS DB by Protein ID:ENSP00000377150
Original member Current member NCBI NM_001326307.2 NP_001313236.1 Accepted alive Link to Nucleotide Sequence:NM_001326307.2Link to Protein Sequence:NP_001313236.1Re-query CCDS DB by Nucleotide ID:NM_001326307Re-query CCDS DB by Protein ID:NP_001313236Link to BLAST:NP_001313236.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001313236.1 711 Q6PJT7-5 711 100% 0 0

Chromosomal Locations for CCDS 86418.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 88563134 88563169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88563651 88563693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88568039 88568153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88571084 88571124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88572030 88572225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88572578 88573007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88574693 88574853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88575840 88575940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88577985 88578140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88601924 88602083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88602828 88603060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88607243 88607363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88609267 88609403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88609712 88609803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88610834 88610940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88611745 88611751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2136 nt):
ATGGAGATCGGCACCGAGATCAGCCGCAAGATCCGGAGTGCCATTAAGGGGAAATTACAAGAATTAGGAG
CTTATGTTGATGAAGAACTTCCTGATTACATTATGGTGATGGTGGCCAACAAGAAAAGTCAGGACCAAAT
GACAGAGGATCTGTCCCTGTTTCTAGGGAACAACACAATTCGATTCACCGTATGGCTTCATGGTGTATTA
GATAAACTTCGCTCTGTTACAACTGAACCCTCTAGTCTGAAGTCTTCTGATACCAACATCTTTGATAGTA
ACGTGCCTTCAAACAAGAGCAATTTCAGTCGGGGAGATGAGAGGAGGCATGAAGCTGCAGTGCCACCACT
TGCCATTCCTAGCGCGAGACCTGAAAAAAGAGATTCCAGAGTTTCTACAAGTTCGCAGGAGTCAAAAACC
ACAAATGTCAGACAGACTTACGATGATGGAGCTGCAACCCGACTAATGTCAACAGTGAAACCTTTGAGGG
AGCCAGCACCCTCTGAAGATGTGATTGATATTAAGCCAGAACCAGATGATCTCATTGACGAAGACCTCAA
CTTTGTGCAGGAGAATCCCTTATCTCAGAAAAAACCTACAGTGACACTTACATATGGTTCTTCTCGCCCT
TCTATTGAAATTTATCGACCACCTGCAAGTAGAAATGCAGATAGTGGTGTTCATTTAAACAGGTTGCAAT
TTCAACAGCAGCAGAATAGTATTCATGCTGCCAAGCAGCTTGATATGCAGAGTAGTTGGGTATATGAAAC
AGGACGTTTGTGTGAACCAGAGGTGCTTAACAGCTTAGAAGAAACGTATAGTCCGTTCTTTAGAAACAAC
TCGGAGAAAATGAGTATGGAGGATGAAAACTTTCGGAAGAGAAAGTTGCCTGTGGTAAGTTCAGTTGTTA
AAGTAAAAAAATTCAATCATGATGGAGAAGAGGAGGAAGAAGATGATGATTACGGGTCTCGAACAGGAAG
CATCTCCAGCAGTGTGTCTGTGCCTGCAAAGCCTGAAAGGAGACCTTCTCTTCCACCTTCTAAACAAGCT
AACAAGAATCTGATTTTGAAGGCTATATCTGAAGCTCAAGAATCCGTAACAAAAACAACTAACTACTCTA
CAGTTCCACAGAAACAGACACTTCCAGTTGCTCCCAGAACTCGAACTTCTCAAGAAGAATTGCTAGCAGA
AGTGGTCCAGGGACAAAGTAGGACCCCCAGAATAAGTCCCCCCATTAAAGAAGAGGAAACAAAAGGAGAT
TCTGTAGAAAAAAATCAAGATTACTATGACATGGAATCCATGGTCCATGCAGACACAAGATCATTTATTC
TGAAGAAGCCAAAGCTGTCTGAGGAAGTAGTAGTGGCACCAAACCAAGAGTCGGGGATGAAGACTGCAGA
TTCCCTTCGGGTACTTTCAGGACACCTTATGCAGACACGAGATCTTGTACAACCAGATAAACCTGCAAGT
CCCAAGTTTATAGTGACGCTGGATGGTGTCCCCAGCCCCCCAGGATACATGTCAGATCAAGAGGAGGACA
TGTGCTTTGAAGGAATGAAACCCGTAAACCAAACTGCAGCCTCAAACAAGGGACTCAGAGGTCTCCTCCA
CCCACAGCAGTTGCACTTGCTGAGCAGGCAGCTTGAGGACCCAAATGGTAGCTTTTCTAACGCTGAGATG
AGTGAACTGAGTGTGGCACAGAAACCAGAAAAACTTTTGGAGCGCTGCAAGTACTGGCCTGCTTGTAAAA
ATGGGGATGAGTGTGCCTACCATCACCCCATCTCACCCTGCAAAGCCTTCCCCAATTGTAAATTTGCTGA
AAAATGTTTGTTTGTTCACCCAAATTGTAAATATGATGCAAAGTGTACTAAACCAGATTGTCCCTTCACT
CATGTGAGTAGAAGAATTCCAGTACTGTCTCCAAAACCAGCAGTTGCACCACCAGCACCACCTTCCAGTA
GTCAGCTCTGCCGTTACTTCCCTGCTTGTAAGAAGATGGAATGTCCCTTCTATCATCCAAAACATTGTAG
GTTTAACACTCAATGTACAAGACCGGACTGCACATTCTACCATCCCACCATTAATGTCCCACCACGACAT
GCCTTGAAATGGATTCGACCTCAAACCAGCGAATAG

Translation (711 aa):
MEIGTEISRKIRSAIKGKLQELGAYVDEELPDYIMVMVANKKSQDQMTEDLSLFLGNNTIRFTVWLHGVL
DKLRSVTTEPSSLKSSDTNIFDSNVPSNKSNFSRGDERRHEAAVPPLAIPSARPEKRDSRVSTSSQESKT
TNVRQTYDDGAATRLMSTVKPLREPAPSEDVIDIKPEPDDLIDEDLNFVQENPLSQKKPTVTLTYGSSRP
SIEIYRPPASRNADSGVHLNRLQFQQQQNSIHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYSPFFRNN
SEKMSMEDENFRKRKLPVVSSVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSVPAKPERRPSLPPSKQA
NKNLILKAISEAQESVTKTTNYSTVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTPRISPPIKEEETKGD
SVEKNQDYYDMESMVHADTRSFILKKPKLSEEVVVAPNQESGMKTADSLRVLSGHLMQTRDLVQPDKPAS
PKFIVTLDGVPSPPGYMSDQEEDMCFEGMKPVNQTAASNKGLRGLLHPQQLHLLSRQLEDPNGSFSNAEM
SELSVAQKPEKLLERCKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFT
HVSRRIPVLSPKPAVAPPAPPSSSQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTINVPPRH
ALKWIRPQTSE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH