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Report for CCDS86733.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86733.1 Public Homo sapiens 19 ZNF738 24 110 108 CCDS HistoryNCBI Gene:148203Re-query CCDS DB by CCDS ID:86733.1Re-query CCDS DB by GeneID:148203See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86733.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000380870.8 ENSP00000370252.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000380870.8Link to Ensembl Protein Viewer:ENSP00000370252.4Re-query CCDS DB by Nucleotide ID:ENST00000380870Re-query CCDS DB by Protein ID:ENSP00000370252
Original member Current member NCBI NM_001355240.2 NP_001342169.1 Accepted alive Link to Nucleotide Sequence:NM_001355240.2Link to Protein Sequence:NP_001342169.1Re-query CCDS DB by Nucleotide ID:NM_001355240Re-query CCDS DB by Protein ID:NP_001342169Link to BLAST:NP_001342169.1

Chromosomal Locations for CCDS 86733.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 21359141 21359143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21361766 21361858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21375238 21375364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21375869 21375964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21378629 21378663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (354 nt):
ATGGACGACCTGAGGTATGGAGTGTATCCTGTCAAGGGGGCAAGTGGATACCCTGGGGCTGAGAGGAATC
TTCTGGAGTACTCTTATTTTGAAAAGGGGCCGTTGACATTTAGGGATGTGGTCATAGAATTCTCTCAGGA
GGAGTGGCAATGCCTGGACACTGCTCAGCAAGATTTGTATAGGAAAGTGATGTTAGAGAACTTCAGAAAC
CTGGTGTTCTTGGGTATTGATGTCTCTAAGCCAGATCTGATCACCTGTCTGGAGCAAGGAAAAGATCCCT
GGAATATGAAGAGACACAGTATGGTAGCCACACCCCCAGATGGAGTTTCACTGTTGTTCCCCAGGCCGGA
GTGA

Translation (117 aa):
MDDLRYGVYPVKGASGYPGAERNLLEYSYFEKGPLTFRDVVIEFSQEEWQCLDTAQQDLYRKVMLENFRN
LVFLGIDVSKPDLITCLEQGKDPWNMKRHSMVATPPDGVSLLFPRPE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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