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Report for CCDS86809.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86809.1 Public Homo sapiens 19 RPL28 24 110 108 CCDS HistoryNCBI Gene:6158Re-query CCDS DB by CCDS ID:86809.1Re-query CCDS DB by GeneID:6158See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86809.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000560055.5 ENSP00000452763.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000560055.5Link to Ensembl Protein Viewer:ENSP00000452763.1Re-query CCDS DB by Nucleotide ID:ENST00000560055Re-query CCDS DB by Protein ID:ENSP00000452763
Original member Current member NCBI NM_001363697.1 NP_001350626.1 Accepted alive Link to Nucleotide Sequence:NM_001363697.1Link to Protein Sequence:NP_001350626.1Re-query CCDS DB by Nucleotide ID:NM_001363697Re-query CCDS DB by Protein ID:NP_001350626Link to BLAST:NP_001350626.1

Chromosomal Locations for CCDS 86809.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 55386358 55386438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55386570 55386693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55387930 55388048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55402943 55403131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (513 nt):
ATGTCTGCGCATCTGCAATGGATGGTCGTGCGGAACTGCTCCAGTTTCCTGATCAAGAGGAATAAGCAGA
CCTACAGCACTGAGCCCAATAACTTGAAGGCCCGCAATTCCTTCCGCTACAACGGACTGATTCACCGCAA
GACTGTGGGCGTGGAGCCGGCAGCCGACGGCAAAGGTGTCGTGGTGGTCATTAAGCGGAGATCCGGCCAG
CGGAAGCCTGCCACCTCCTATGTGCGGACCACCATCAACAAGAATGCTCGCGCCACGCTCAGCAGCATCA
GACACATGATCCGCAAGAACAAGTACCGCCCCGACCTGCGCATGCTTGCGGGAAGGGTTGGGAGGCAGCA
GGCTGTAAGCAGCCTGGAGCACCAGCCTAGACCAGGACGCCTCCACCTCAGCAACACCGCAGCCAGGTCA
TTCTGTGTCATGGAGCCATCTCGTACGCTGCAGGATTTGGGCAGCACCCTTGGCCTCCACCCACTAGATG
CTAGTGGCACCCCCGAGTTGTGA

Translation (170 aa):
MSAHLQWMVVRNCSSFLIKRNKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVIKRRSGQ
RKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMLAGRVGRQQAVSSLEHQPRPGRLHLSNTAARS
FCVMEPSRTLQDLGSTLGLHPLDASGTPEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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