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Report for CCDS87133.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87133.1 Public Homo sapiens 3 CFAP92 24 110 108 CCDS HistoryNCBI Gene:57501Re-query CCDS DB by CCDS ID:87133.1Re-query CCDS DB by GeneID:57501See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87133.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000515659.1 ENSP00000422539.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000515659.1Link to Ensembl Protein Viewer:ENSP00000422539.1Re-query CCDS DB by Nucleotide ID:ENST00000515659Re-query CCDS DB by Protein ID:ENSP00000422539
Original member Current member NCBI NM_001348522.2 NP_001335451.1 Accepted alive Link to Nucleotide Sequence:NM_001348522.2Link to Protein Sequence:NP_001335451.1Re-query CCDS DB by Nucleotide ID:NM_001348522Re-query CCDS DB by Protein ID:NP_001335451Link to BLAST:NP_001335451.1
Original member Current member NCBI NM_001348523.2 NP_001335452.1 Accepted alive Link to Nucleotide Sequence:NM_001348523.2Link to Protein Sequence:NP_001335452.1Re-query CCDS DB by Nucleotide ID:NM_001348523Re-query CCDS DB by Protein ID:NP_001335452Link to BLAST:NP_001335452.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001335451.1 297 Q9ULG3-2 297 100% 0 0
NP_001335452.1 297 Q9ULG3-2 297 100% 0 0

Chromosomal Locations for CCDS 87133.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 128971225 128971433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128975779 128975903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128976979 128977066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128978045 128978185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128987616 128987829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 128988728 128988844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (894 nt):
ATGCGTCGTTTTTACCACATTGAGTATTTCCTTCTGCCGGACGATGAAGAACCTAAAAAAGTTGACATAT
TGCTATTTCCAATGGTGGCCAAAGTATTCCTGGAGTCAGGAGTAAAGACTGTGAAGCCGTGGCACGAAGG
TGACAAAGCCTGGGTGTCGTGGGAGCAGACTTTTAATATCACTGTGACAAAGGAATTATTAAAGAAAATA
AATTTCCACAAAATCACCTTGAGGCTCTGGAACACTAAAGACAAGATGTCAAGAAAAGTCAGATATTACC
GATTAAAGACTGCCGGCTTCACAGACGACGTGGGAGCTTTTCATAAGTCAGAAGTGAGACATTTGGTTTT
AAATCAGAGAAAATTATCTGAACAGGGCATTGAGAATACCAACATTGTCAGAGAAGAGTCGAACCAGGAA
CATCCGCCAGGAAAACAAGAAAAAACAGAAAAACACCCAAAGTCTTTGCAAGGTTCTCACCAAGCAGAGC
CCGAAACTTCTTCCAAGAACAGTGAGGAATATGAGAAGTCCCTCAAAATGGACGATTCTTCCACGATTCA
ATGGAGTGTTTCAAGAACACCAACCATTTCTTTGGCAGGAGCAAGCATGATGGAGATCAAGGAATTAATT
GAGAGTGAATCACTTAGCAGCTTAACAAACATATTAGACAGACAAAGGTCTCAAATTAAAGGGAAAGATT
CAGAGGGAAGAAGGAAAATCCAGAGGAGACATAAGAAGCCCCTGGCAGAAGAAGAGGCAGACCCCACGCT
GACAGGCCCCAGGAAGCAGAGCGCTTTCTCCATCCAGCTGGCCGTCATGCCGCTCCTTGCCGGTACCCAC
TGCTTGCCCTGTTCCCAGCAGCTCCTGCTTGTCTTGTGGCCAGAACGGCCATAA

Translation (297 aa):
MRRFYHIEYFLLPDDEEPKKVDILLFPMVAKVFLESGVKTVKPWHEGDKAWVSWEQTFNITVTKELLKKI
NFHKITLRLWNTKDKMSRKVRYYRLKTAGFTDDVGAFHKSEVRHLVLNQRKLSEQGIENTNIVREESNQE
HPPGKQEKTEKHPKSLQGSHQAEPETSSKNSEEYEKSLKMDDSSTIQWSVSRTPTISLAGASMMEIKELI
ESESLSSLTNILDRQRSQIKGKDSEGRRKIQRRHKKPLAEEEADPTLTGPRKQSAFSIQLAVMPLLAGTH
CLPCSQQLLLVLWPERP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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