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Report for CCDS87137.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87137.1 Public Homo sapiens 3 RAB6B 24 110 108 CCDS HistoryNCBI Gene:51560Re-query CCDS DB by CCDS ID:87137.1Re-query CCDS DB by GeneID:51560See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87137.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000486858.5 ENSP00000419381.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000486858.5Link to Ensembl Protein Viewer:ENSP00000419381.1Re-query CCDS DB by Nucleotide ID:ENST00000486858Re-query CCDS DB by Protein ID:ENSP00000419381
Original member Current member NCBI NM_001363953.1 NP_001350882.1 Accepted alive Link to Nucleotide Sequence:NM_001363953.1Link to Protein Sequence:NP_001350882.1Re-query CCDS DB by Nucleotide ID:NM_001363953Re-query CCDS DB by Protein ID:NP_001350882Link to BLAST:NP_001350882.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001350882.1 195 Q9NRW1-2 195 100% 0 0

Chromosomal Locations for CCDS 87137.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 133828788 133828852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133834575 133834641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133838166 133838259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133839506 133839617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133841285 133841390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133841610 133841663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133864584 133864642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133885535 133885565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (588 nt):
ATGTGGCATATGACCAGAAACTGGCCATTGGTCGGGAAGACGTCTCTGATTACGAGGTTCATGTACGACA
GCTTCGACAACACATACCAGGCAACCATTGGGATTGACTTCTTGTCAAAAACCATGTACTTGGAGGACCG
CACGGTGCGACTGCAGCTCTGGGACACAGCTGGTCAGGAGAGGTTCCGCAGCCTGATCCCCAGCTACATC
CGGGACTCCACGGTGGCTGTGGTGGTGTACGACATCACAAATCTCAACTCCTTCCAACAGACCTCTAAGT
GGATCGACGACGTCAGGACAGAGAGGGGCAGTGATGTTATCATCATGCTGGTGGGCAACAAGACGGACCT
GGCTGATAAGAGGCAGATAACCATCGAGGAGGGGGAGCAGCGCGCCAAAGAACTGAGCGTCATGTTCATT
GAGACCAGTGCGAAGACTGGCTACAACGTGAAGCAGCTTTTTCGACGTGTGGCGTCGGCTCTACCCGGAA
TGGAGAATGTCCAGGAGAAAAGCAAAGAAGGGATGATCGACATCAAGCTGGACAAACCCCAGGAGCCCCC
GGCCAGCGAGGGCGGCTGCTCCTGCTAA

Translation (195 aa):
MWHMTRNWPLVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI
RDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFI
ETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKLDKPQEPPASEGGCSC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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