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Report for CCDS87141.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87141.1 Public Homo sapiens 3 NME9 24 110 108 CCDS HistoryNCBI Gene:347736Re-query CCDS DB by CCDS ID:87141.1Re-query CCDS DB by GeneID:347736See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87141.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000484930.5 ENSP00000419882.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000484930.5Link to Ensembl Protein Viewer:ENSP00000419882.1Re-query CCDS DB by Nucleotide ID:ENST00000484930Re-query CCDS DB by Protein ID:ENSP00000419882
Original member Current member NCBI NM_001349021.2 NP_001335950.1 Accepted alive Link to Nucleotide Sequence:NM_001349021.2Link to Protein Sequence:NP_001335950.1Re-query CCDS DB by Nucleotide ID:NM_001349021Re-query CCDS DB by Protein ID:NP_001335950Link to BLAST:NP_001335950.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001335950.1 261 Q86XW9-3 261 100% 0 0

Chromosomal Locations for CCDS 87141.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 138262540 138262586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138303507 138303643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138304873 138305027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138306004 138306096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138306398 138306480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138314332 138314407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138319478 138319581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138324873 138324930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138329303 138329335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (786 nt):
ATGGGCAGCAGGAAGAAGGAAATTGCCCTGCAGGTCAACATCAGCACCCAAGAGCTTTGGGAGGAAATGC
TCAGTTCCAAAGGACTAACTGTTGTTGATGTCTATCAAGGCTGGTGTGGCCCCTGCAAACCTGTGGTGAG
CCTCTTCCAGAAGATGAGGATCGAGGTCGGCCTGGACCTTCTGCACTTTGCATTAATTAAAGATGAGGCT
CTTTCTGATGAAGATGAATGTGTTTCCCATGGAAAGAATAATGGTGAAGATGAGGACATGGTTTCATCAG
AGAGGACCTGTACCTTGGCCATCATTAAACCAGATGCAGTGGCCCATGGAAAGACTGATGAGATTATCAT
GAAGATTCAGGAAGCTGGGTTTGAAATTCTAACAAATGAAGAGAGAACCATGACAGAGGCAGAAGTGCGA
CTTTTCTACCAACACAAAGCTGGAGAGGAGGCATTTGAGAAGCTGGTACATCACATGTGCAGTGGACCAA
GCCACCTCCTGATCCTCACCAGGACTGAGGGCTTCGAGGACGTGGTCACTACCTGGCGAACCGTCATGGG
CCCCCGTGACCCCAATGTGGCCAGGAGGGAGCAGCCAGAAAGTCTCCGAGCTCAGTACGGCACAGAAATG
CCCTTCAATGCCGTCCATGGAAGCCGGGACAGAGAAGATGCTGACAGAGAACTGGCATTGCTCTTCCCCA
GTTTGAAATTTTCAGACAAAGATACAGAAGCCCCTCAGGGTGAGTCCAGTACACAGCCAAGGTTGAAGAT
CACTGACCTAGACTAA

Translation (261 aa):
MGSRKKEIALQVNISTQELWEEMLSSKGLTVVDVYQGWCGPCKPVVSLFQKMRIEVGLDLLHFALIKDEA
LSDEDECVSHGKNNGEDEDMVSSERTCTLAIIKPDAVAHGKTDEIIMKIQEAGFEILTNEERTMTEAEVR
LFYQHKAGEEAFEKLVHHMCSGPSHLLILTRTEGFEDVVTTWRTVMGPRDPNVARREQPESLRAQYGTEM
PFNAVHGSRDREDADRELALLFPSLKFSDKDTEAPQGESSTQPRLKITDLD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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