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Report for CCDS8724.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8724.1 Public Homo sapiens 12 ETFBKMT 24 110 108 CCDS HistoryNCBI Gene:254013Re-query CCDS DB by CCDS ID:8724.1Re-query CCDS DB by GeneID:254013See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8724.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357721.3 ENSP00000350353.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357721.3Link to Ensembl Protein Viewer:ENSP00000350353.3Re-query CCDS DB by Nucleotide ID:ENST00000357721Re-query CCDS DB by Protein ID:ENSP00000350353
Original member Current member EBI ENST00000395763.7 ENSP00000379112.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395763.7Link to Ensembl Protein Viewer:ENSP00000379112.3Re-query CCDS DB by Nucleotide ID:ENST00000395763Re-query CCDS DB by Protein ID:ENSP00000379112
Original member Current member EBI ENST00000412352.6 ENSP00000396123.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000412352.6Link to Ensembl Protein Viewer:ENSP00000396123.2Re-query CCDS DB by Nucleotide ID:ENST00000412352Re-query CCDS DB by Protein ID:ENSP00000396123
Original member Current member EBI ENST00000538463.5 ENSP00000441421.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000538463.5Link to Ensembl Protein Viewer:ENSP00000441421.1Re-query CCDS DB by Nucleotide ID:ENST00000538463Re-query CCDS DB by Protein ID:ENSP00000441421
Original member Current member NCBI NM_001135863.2 NP_001129335.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001135863.2Link to Protein Sequence:NP_001129335.1Re-query CCDS DB by Nucleotide ID:NM_001135863Re-query CCDS DB by Protein ID:NP_001129335Link to BLAST:NP_001129335.1
Original member Current member NCBI NM_001135864.2 NP_001129336.1 Accepted alive Link to Nucleotide Sequence:NM_001135864.2Link to Protein Sequence:NP_001129336.1Re-query CCDS DB by Nucleotide ID:NM_001135864Re-query CCDS DB by Protein ID:NP_001129336Link to BLAST:NP_001129336.1
Original member Current member NCBI NM_173802.4 NP_776163.1 Accepted alive Link to Nucleotide Sequence:NM_173802.4Link to Protein Sequence:NP_776163.1Re-query CCDS DB by Nucleotide ID:NM_173802Re-query CCDS DB by Protein ID:NP_776163Link to BLAST:NP_776163.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129335.1 262 Q8IXQ9 262 100% 0 0
NP_001129336.1 262 Q8IXQ9 262 100% 0 0
NP_776163.1 262 Q8IXQ9 262 100% 0 0

Chromosomal Locations for CCDS 8724.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 31661954 31662267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31666087 31666217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31667647 31667990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (789 nt):
ATGGCTTTGAGTCTAGGTTGGAAAGCACACAGGAACCACTGTGGTCTCCTCTTGCAGGCTCTGCGAAGCA
GTGGTCTTCTCTTGTTTCCCTGTGGCCAGTGTCCCTGGAGAGGAGCTGGAAGCTTTTTGGACCCTGAGAT
AAAGGCTTTCCTGGAGGAGAACACTGAAGTCACCAGCAGTGGTAGCCTCACCCCTGAAATCCAGTTGCGG
CTTTTGACCCCCAGATGCAAATTCTGGTGGGAGAGAGCTGACCTGTGGCCCCACAGTGATCCTTACTGGG
CAATCTACTGGCCAGGAGGCCAAGCCCTGTCTAGGTATCTTTTGGATAATCCTGATGTTGTCAGAGGAAA
ATCTGTATTAGATCTTGGGAGTGGATGTGGAGCTACAGCTATTGCTGCTAAGATGAGTGGGGCATCAAGG
ATCTTGGCCAATGACATAGACCCTATTGCAGGAATGGCTATTACACTAAATTGTGAATTGAACAGACTGA
ATCCTTTTCCTATTTTAATCCAAAACATTTTGAATTTGGAACAAGATAAGTGGGACCTTGTTGTTCTTGG
CGATATGTTTTATGATGAAGACCTTGCAGATAGTCTTCATCAGTGGCTGAAGAAGTGCTTCTGGACCTAT
AGAACTCGAGTACTGATTGGTGACCCTGGGCGGCCCCAGTTCAGTGGACACAGCATTCAGCATCACCTGC
ACAAAGTGGTAGAATATTCACTTTTGGAGTCTACTAGGCAGGAAAACAGTGGACTGACAACAAGCACAGT
GTGGGGTTTTCAGCCTTGA

Translation (262 aa):
MALSLGWKAHRNHCGLLLQALRSSGLLLFPCGQCPWRGAGSFLDPEIKAFLEENTEVTSSGSLTPEIQLR
LLTPRCKFWWERADLWPHSDPYWAIYWPGGQALSRYLLDNPDVVRGKSVLDLGSGCGATAIAAKMSGASR
ILANDIDPIAGMAITLNCELNRLNPFPILIQNILNLEQDKWDLVVLGDMFYDEDLADSLHQWLKKCFWTY
RTRVLIGDPGRPQFSGHSIQHHLHKVVEYSLLESTRQENSGLTTSTVWGFQP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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