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Report for CCDS8745.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8745.1 Public Homo sapiens 12 TMEM117 24 110 108 CCDS HistoryNCBI Gene:84216Re-query CCDS DB by CCDS ID:8745.1Re-query CCDS DB by GeneID:84216See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8745.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000266534.8 ENSP00000266534.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000266534.8Link to Ensembl Protein Viewer:ENSP00000266534.3Re-query CCDS DB by Nucleotide ID:ENST00000266534Re-query CCDS DB by Protein ID:ENSP00000266534
Original member Current member NCBI NM_032256.3 NP_115632.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032256.3Link to Protein Sequence:NP_115632.1Re-query CCDS DB by Nucleotide ID:NM_032256Re-query CCDS DB by Protein ID:NP_115632Link to BLAST:NP_115632.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115632.1 514 Q9H0C3 514 100% 0 0

Chromosomal Locations for CCDS 8745.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 43844652 43844928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 43944210 43944342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 44143525 44143624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 44211290 44211387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 44299580 44299739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 44376595 44376724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 44388026 44388672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1545 nt):
ATGGGTAAAGACTTTCGTTACTATTTCCAGCATCCCTGGTCTCGCATGATTGTGGCTTACTTGGTGATCT
TCTTTAACTTCTTAATATTTGCGGAGGACCCAGTTTCTCATAGCCAAACAGAAGCCAATGTTATTGTTGT
TGGAAACTGTTTTTCATTTGTTACAAATAAATACCCTAGAGGAGTTGGCTGGAGGATTTTGAAGGTGCTT
CTATGGCTACTTGCCATTCTCACAGGACTAATAGCTGGCAAATTTCTGTTCCATCAGCGTTTGTTTGGTC
AGTTGCTCCGATTAAAAATGTTTCGAGAAGATCATGGGTCGTGGATGACAATGTTCTTCAGCACAATTCT
CTTTCTCTTCATATTTTCTCACATATACAACACGATTCTTCTAATGGATGGGAACATGGGAGCATATATC
ATTACAGACTATATGGGCATCCGAAATGAAAGTTTCATGAAATTAGCTGCAGTAGGGACCTGGATGGGGG
ACTTTGTCACAGCTTGGATGGTCACTGATATGATGCTTCAGGACAAACCCTATCCTGACTGGGGAAAATC
AGCAAGAGCTTTCTGGAAGAAAGGAAATGTTAGGATCACTTTATTCTGGACAGTTCTTTTTACTCTGACG
TCTGTGGTTGTACTTGTGATTACAACGGACTGGATCAGCTGGGACAAGCTGAATCGGGGATTTTTGCCCA
GTGATGAAGTTTCCAGAGCATTCCTTGCTTCTTTTATCTTGGTCTTTGACCTTCTTATTGTGATGCAGGA
CTGGGAATTCCCACATTTCATGGGAGATGTTGATGTAAATCTCCCTGGTTTGCACACCCCTCACATGCAG
TTCAAGATTCCTTTCTTCCAGAAAATCTTCAAGGAGGAATATCGTATTCACATAACAGGCAAATGGTTTA
ACTATGGAATTATCTTCCTCGTCTTGATTTTGGATCTTAATATGTGGAAGAACCAAATATTTTATAAACC
TCATGAATATGGGCAATATATCGGCCCGGGGCAGAAGATATATACAGTGAAAGACTCAGAAAGTTTAAAA
GATTTGAACAGAACCAAGCTATCCTGGGAATGGAGGTCCAATCACACTAACCCTCGGACTAATAAAACAT
ATGTTGAGGGAGACATGTTCTTACACAGCAGGTTCATAGGAGCCAGTCTTGATGTCAAGTGTCTGGCCTT
TGTTCCAAGCCTGATAGCCTTTGTGTGGTTTGGATTCTTTATTTGGTTCTTTGGACGATTTTTGAAAAAT
GAGCCACGCATGGAGAATCAAGACAAAACTTACACTCGCATGAAAAGAAAATCTCCATCAGAACATAGCA
AAGACATGGGAATCACTCGAGAAAACACCCAGGCTTCAGTAGAAGACCCCTTGAATGACCCTTCTTTGGT
TTGCATCAGGTCTGACTTCAATGAGATCGTCTACAAGTCTTCCCACCTAACCTCGGAAAACTTGAGCTCA
CAGTTGAACGAATCTACTAGTGCAACAGAAGCTGATCAAGACCCAACGACTTCTAAAAGTACACCTACGA
ACTAG

Translation (514 aa):
MGKDFRYYFQHPWSRMIVAYLVIFFNFLIFAEDPVSHSQTEANVIVVGNCFSFVTNKYPRGVGWRILKVL
LWLLAILTGLIAGKFLFHQRLFGQLLRLKMFREDHGSWMTMFFSTILFLFIFSHIYNTILLMDGNMGAYI
ITDYMGIRNESFMKLAAVGTWMGDFVTAWMVTDMMLQDKPYPDWGKSARAFWKKGNVRITLFWTVLFTLT
SVVVLVITTDWISWDKLNRGFLPSDEVSRAFLASFILVFDLLIVMQDWEFPHFMGDVDVNLPGLHTPHMQ
FKIPFFQKIFKEEYRIHITGKWFNYGIIFLVLILDLNMWKNQIFYKPHEYGQYIGPGQKIYTVKDSESLK
DLNRTKLSWEWRSNHTNPRTNKTYVEGDMFLHSRFIGASLDVKCLAFVPSLIAFVWFGFFIWFFGRFLKN
EPRMENQDKTYTRMKRKSPSEHSKDMGITRENTQASVEDPLNDPSLVCIRSDFNEIVYKSSHLTSENLSS
QLNESTSATEADQDPTTSKSTPTN


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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