NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS87564.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87564.1 Public Homo sapiens 7 GIMAP4 24 110 108 CCDS HistoryNCBI Gene:55303Re-query CCDS DB by CCDS ID:87564.1Re-query CCDS DB by GeneID:55303See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87564.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000461940.5 ENSP00000419545.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000461940.5Link to Ensembl Protein Viewer:ENSP00000419545.1Re-query CCDS DB by Nucleotide ID:ENST00000461940Re-query CCDS DB by Protein ID:ENSP00000419545
Original member Current member NCBI NM_001363532.2 NP_001350461.1 Accepted alive Link to Nucleotide Sequence:NM_001363532.2Link to Protein Sequence:NP_001350461.1Re-query CCDS DB by Nucleotide ID:NM_001363532Re-query CCDS DB by Protein ID:NP_001350461Link to BLAST:NP_001350461.1

Chromosomal Locations for CCDS 87564.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 150569902 150570001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 150572129 150573060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1032 nt):
ATGGCAGCCCAATACGGCAGTATGAGCTTCAACCCCAGCACACCAGGGGCCAGTTATGGTGAGAGGGCAT
TCAGTGCTCCCCAGACCAGGCTGCAGGGAGGGCCTGGAAGGCAAGAGCCCAGAAATTCCCAATTGAGAAT
TGTGTTAGTGGGTAAAACCGGAGCAGGAAAAAGTGCAACAGGAAACAGCATCCTTGGCCGGAAAGTGTTT
CATTCTGGCACTGCAGCAAAATCCATTACCAAGAAGTGTGAGAAACGCAGCAGCTCATGGAAGGAAACAG
AACTTGTCGTAGTTGACACACCAGGCATTTTCGACACAGAGGTGCCCAATGCTGAAACGTCCAAGGAGAT
TATTCGCTGCATTCTTCTGACCTCCCCAGGGCCTCATGCTCTGCTTCTGGTGGTTCCACTGGGCCGTTAC
ACTGAGGAAGAGCACAAAGCCACAGAGAAGATCCTGAAAATGTTTGGAGAGAGGGCTAGAAGTTTCATGA
TTCTCATATTCACCCGGAAAGATGACTTAGGTGACACCAATTTGCATGACTACTTAAGGGAAGCTCCAGA
AGACATTCAAGACTTGATGGACATTTTCGGTGACCGCTACTGTGCGTTAAACAACAAGGCAACAGGCGCT
GAGCAGGAGGCCCAGAGGGCACAGTTGCTGGGCCTGATCCAGCGCGTGGTGAGGGAGAACAAGGAAGGCT
GCTACACTAATAGGATGTACCAAAGGGCGGAGGAGGAGATCCAGAAGCAAACACAAGCAATGCAAGAACT
CCACAGAGTGGAGCTGGAGAGAGAGAAAGCGCGGATAAGAGAGGAGTATGAAGAGAAAATCAGAAAGCTG
GAAGATAAAGTGGAGCAGGAAAAGAGAAAGAAGCAAATGGAGAAGAAACTAGCAGAACAGGAGGCTCACT
ATGCTGTAAGGCAGCAAAGGGCAAGAACGGAAGTGGAGAGTAAGGATGGGATACTTGAATTAATCATGAC
AGCGTTACAGATTGCTTCCTTTATTTTGTTACGTCTGTTCGCGGAAGATTAA

Translation (343 aa):
MAAQYGSMSFNPSTPGASYGERAFSAPQTRLQGGPGRQEPRNSQLRIVLVGKTGAGKSATGNSILGRKVF
HSGTAAKSITKKCEKRSSSWKETELVVVDTPGIFDTEVPNAETSKEIIRCILLTSPGPHALLLVVPLGRY
TEEEHKATEKILKMFGERARSFMILIFTRKDDLGDTNLHDYLREAPEDIQDLMDIFGDRYCALNNKATGA
EQEAQRAQLLGLIQRVVRENKEGCYTNRMYQRAEEEIQKQTQAMQELHRVELEREKARIREEYEEKIRKL
EDKVEQEKRKKQMEKKLAEQEAHYAVRQQRARTEVESKDGILELIMTALQIASFILLRLFAED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH