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Report for CCDS886.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
886.1 Public Homo sapiens 1 MAB21L3 24 110 108 CCDS HistoryNCBI Gene:126868Re-query CCDS DB by CCDS ID:886.1Re-query CCDS DB by GeneID:126868See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 886.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369500.4 ENSP00000358512.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369500.4Link to Ensembl Protein Viewer:ENSP00000358512.3Re-query CCDS DB by Nucleotide ID:ENST00000369500Re-query CCDS DB by Protein ID:ENSP00000358512
Original member Current member EBI ENST00000684484.1 ENSP00000506754.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000684484.1Link to Ensembl Protein Viewer:ENSP00000506754.1Re-query CCDS DB by Nucleotide ID:ENST00000684484Re-query CCDS DB by Protein ID:ENSP00000506754
Original member Current member EBI ENST00000683341.1 ENSP00000508049.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000683341.1Link to Ensembl Protein Viewer:ENSP00000508049.1Re-query CCDS DB by Nucleotide ID:ENST00000683341Re-query CCDS DB by Protein ID:ENSP00000508049
Original member Current member NCBI NM_152367.3 NP_689580.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152367.3Link to Protein Sequence:NP_689580.2Re-query CCDS DB by Nucleotide ID:NM_152367Re-query CCDS DB by Protein ID:NP_689580Link to BLAST:NP_689580.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689580.2 362 Q8N8X9 362 100% 0 0

Chromosomal Locations for CCDS 886.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 116112616 116112663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 116120932 116121072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 116124066 116124357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 116127466 116127644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 116128145 116128339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 116133132 116133365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1089 nt):
ATGAAATACCTTACTGTGGGAGACTTAGAAGATTGCCTACTGAATAAGGTGGACTTGAGGCGCCAGCAGA
TTTCCCAGGCTGTGGAGGAGGTGCAGAAAGTCGTTCATCATTTGACCACAAACATCAGCAACCAAGACAT
TAGATTTCAAGCTGTGCCTTACTCTGACACGTACAATGAAAATATTAAGGTTTTGGCTCCCAGTCAGTTC
CTCGTCACAGTCCCAATAAAAGGCCTGGCCGGGTACAGGGAGGCCAGGGAGCAGCACTGGCGGTACTACA
CACTGCAGGGCACCAGGCTGCCCTGCCCGTTGCGGGACCCTGAGGGTCTGCAGCAGTGGCTGGAGGTGGA
ACAGTTTATGAAGAGCCTGTGGCAGTGGCATGAGACAGATGTGAACATCGACGGAGACATTGTGCCTGCC
AAGGTCCTCCTAGTGTTCCGGAAGCTGGTGGAAAATGCAGTTAGAACCTGTCACCTCTCAGGTAAGGTCA
GCCTGCTAGGAAACCGCTCTGCAGTTTGGGTTGCTGTGGAAACATCTGCATATCAGGTGGAACTGGAGCT
GGTCCCCGCAGTGGAGATCCCCACCACCTGGTCCAAGAAAGCCCGGTGGCCTCGATGTCTGCAGCGCTGG
CCTTCCCAAGAGAGAGTGGAGTGCATCAAGTCGTTTGGATTTAACTTGTTGGCCTGTTCAAATTATCACT
GGCAGCTGAGCTTCCTCCGTGCTGAGCAGGTGTTACTGGAACAGCTGGATGAAGATGGGGGCTGCCGTAG
GAAGTGTTTTCAGGTCATGAGGCACCTGAAGGAGGACATCTGGTGCCCAGGGAACAGGCCGGTTATCACG
TCCCACCATCTGCAGACTGTGCTCTTTTGGACCTGCGAGAAATATCCCCACTTTAAAGACTGGCAGGTCT
TCAGCAAAGCATTTCTGCGCCTGGTGAGGAAACTGCACAAGTGCGTGAGCCAGCACTTCCTGAAACACTA
TTTCGTCCGGAACAGCAACCTCTTTCAGTGCACCAACCCGACTGAACTGGACACTGTGGCCCAAAAGCTG
GCCACCTTCCTGAAGAACCCCCAGATCGGCCCGCCCTGA

Translation (362 aa):
MKYLTVGDLEDCLLNKVDLRRQQISQAVEEVQKVVHHLTTNISNQDIRFQAVPYSDTYNENIKVLAPSQF
LVTVPIKGLAGYREAREQHWRYYTLQGTRLPCPLRDPEGLQQWLEVEQFMKSLWQWHETDVNIDGDIVPA
KVLLVFRKLVENAVRTCHLSGKVSLLGNRSAVWVAVETSAYQVELELVPAVEIPTTWSKKARWPRCLQRW
PSQERVECIKSFGFNLLACSNYHWQLSFLRAEQVLLEQLDEDGGCRRKCFQVMRHLKEDIWCPGNRPVIT
SHHLQTVLFWTCEKYPHFKDWQVFSKAFLRLVRKLHKCVSQHFLKHYFVRNSNLFQCTNPTELDTVAQKL
ATFLKNPQIGPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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