NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS88673.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
88673.1 Public Mus musculus 14 Gzmn 23 108 98 CCDS HistoryNCBI Gene:245839Re-query CCDS DB by CCDS ID:88673.1Re-query CCDS DB by GeneID:245839See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 88673.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000225535.1 ENSMUSP00000153137.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000225535.1Link to Ensembl Protein Viewer:ENSMUSP00000153137.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000225535Re-query CCDS DB by Protein ID:ENSMUSP00000153137
Original member NCBI NM_001305808.1 NP_001292737.1 Updated not alive Link to Nucleotide Sequence:NM_001305808.1Link to Protein Sequence:NP_001292737.1Re-query CCDS DB by Nucleotide ID:NM_001305808Re-query CCDS DB by Protein ID:NP_001292737
Current member NCBI NM_001305808.2 NP_001292737.1 Accepted alive Link to Nucleotide Sequence:NM_001305808.2Link to Protein Sequence:NP_001292737.1Re-query CCDS DB by Nucleotide ID:NM_001305808Re-query CCDS DB by Protein ID:NP_001292737Link to BLAST:NP_001292737.1

Chromosomal Locations for CCDS 88673.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 56166043 56166047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 56166742 56167036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 56167240 56167375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 56167820 56167970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 56169012 56169066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (642 nt):
ATGCTACCAGTTCTGATTCTCCTGATCTTTCTTCTGCCAGTAGGAGATGGAGCAGAGGAGGTCATCGGGG
GCCATGAGGTCAAGCCCCACTCTCGCCCTTACATGGCATTAGTTGTGTTTCTGAAAGTTAATGGGATTGG
AAGTTCCTGTGGCGGCTTCCTGGTTCAAGACTACTTTGTGCTGACGGCTGCTCACTGCATTGGAAGCTCA
ATGACAGTCACACTGGGGGCCCACAACCTCCGTGCACAGGAGGAGACTCAGCAGATTATTCCTGTGAATA
AAGCTCTTCCCCACCCAGACTATAATCCTCTGGATCACACCAATGACATCATGCTATTAAAGCTGGAGAG
TAAGGCCAAGGGGACTAGAGATGTGAGGCCCCTCAAGTTGCCTGGGCCCAAAGACAAGGTGAATCCAGGG
GATGTGTGCAGTGTGGCTGGCTGGGGGAAAACGTCCATCAATACCACTGAAGGATCTGCTCTCTTAGAAG
AGGCTGAATTGATCATCCAGGAGAACAAGGAATGCAAAAAACAATTCCGTCACTATTCCAAAATCACAGA
GATTTGTGCTGGAGACCCAAACAAAATAGAGGCTCCGTCCAAGGTGGGGATCAAGCAATTCACAGACAAA
ATCCAGGGGTGA

Translation (213 aa):
MLPVLILLIFLLPVGDGAEEVIGGHEVKPHSRPYMALVVFLKVNGIGSSCGGFLVQDYFVLTAAHCIGSS
MTVTLGAHNLRAQEETQQIIPVNKALPHPDYNPLDHTNDIMLLKLESKAKGTRDVRPLKLPGPKDKVNPG
DVCSVAGWGKTSINTTEGSALLEEAELIIQENKECKKQFRHYSKITEICAGDPNKIEAPSKVGIKQFTDK
IQG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH