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Report for CCDS8893.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8893.1 Public Homo sapiens 12 ORMDL2 24 110 108 CCDS HistoryNCBI Gene:29095Re-query CCDS DB by CCDS ID:8893.1Re-query CCDS DB by GeneID:29095See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8893.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000243045.10 ENSP00000243045.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000243045.10Link to Ensembl Protein Viewer:ENSP00000243045.5Re-query CCDS DB by Nucleotide ID:ENST00000243045Re-query CCDS DB by Protein ID:ENSP00000243045
Original member Current member EBI ENST00000548974.1 ENSP00000448788.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000548974.1Link to Ensembl Protein Viewer:ENSP00000448788.1Re-query CCDS DB by Nucleotide ID:ENST00000548974Re-query CCDS DB by Protein ID:ENSP00000448788
Original member Current member NCBI NM_014182.5 NP_054901.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014182.5Link to Protein Sequence:NP_054901.1Re-query CCDS DB by Nucleotide ID:NM_014182Re-query CCDS DB by Protein ID:NP_054901Link to BLAST:NP_054901.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_054901.1 153 Q53FV1 153 100% 0 0

Chromosomal Locations for CCDS 8893.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 55819000 55819173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55819342 55819493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55820260 55820395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (462 nt):
ATGAATGTGGGGGTGGCACACAGCGAAGTAAACCCCAACACCCGAGTGATGAATAGCCGAGGCATCTGGC
TGGCCTACATCATCTTGGTAGGATTGCTGCATATGGTTCTACTCAGCATCCCCTTCTTCAGCATTCCTGT
TGTCTGGACCCTGACCAACGTCATCCATAACCTGGCTACGTATGTCTTCCTTCATACGGTGAAAGGGACA
CCCTTTGAGACTCCTGACCAAGGAAAGGCTCGGCTACTGACACACTGGGAGCAAATGGACTATGGGCTCC
AGTTTACCTCTTCCCGCAAGTTCCTCAGCATCTCTCCTATTGTGCTCTATCTCCTGGCCAGCTTCTATAC
CAAGTATGATGCTGCGCACTTCCTCATCAACACAGCCTCATTGCTAAGTGTACTGCTGCCGAAGTTGCCC
CAGTTCCATGGGGTTCGTGTCTTTGGCATCAACAAATACTGA

Translation (153 aa):
MNVGVAHSEVNPNTRVMNSRGIWLAYIILVGLLHMVLLSIPFFSIPVVWTLTNVIHNLATYVFLHTVKGT
PFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYDAAHFLINTASLLSVLLPKLP
QFHGVRVFGINKY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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