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Report for CCDS89651.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89651.1 Public Mus musculus 3 Dap3 23 108 98 CCDS HistoryNCBI Gene:65111Re-query CCDS DB by CCDS ID:89651.1Re-query CCDS DB by GeneID:65111See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89651.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000173135.7 ENSMUSP00000134422.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000173135.7Link to Ensembl Protein Viewer:ENSMUSP00000134422.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000173135Re-query CCDS DB by Protein ID:ENSMUSP00000134422
Original member Current member NCBI NM_001368419.1 NP_001355348.1 Accepted alive Link to Nucleotide Sequence:NM_001368419.1Link to Protein Sequence:NP_001355348.1Re-query CCDS DB by Nucleotide ID:NM_001368419Re-query CCDS DB by Protein ID:NP_001355348Link to BLAST:NP_001355348.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001355348.1 391 Q9ER88-1 391 100% 0 0

Chromosomal Locations for CCDS 89651.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 88923828 88923913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 88925294 88925411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 88926272 88926361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 88927011 88927070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 88928209 88928367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 88928447 88928527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 88929396 88929526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 88930476 88930568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 88930912 88931020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 88933565 88933666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 88936149 88936253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 88942775 88942816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1176 nt):
ATGCTGACAGGAATAACAAGGCTTTTCTCCAGGGTCCAGAAGTTGGACCCGAGGTGTTTTTTGCACATGA
GTGTTCAAGCGACTCAGAACAGTCAGGTTCCAGCTGAGCGTCCCAGAACTGTTTCCCGCACCAGTGACAG
TGACCCGGCTAAGCATGGGGAGCAGCATGAGGGTCAGCACTACAGCATCCCCCTCCAGGATCTGAAGACA
GTGTTTCCTCACGGCCTGCCTCCTCGGTACATGATGCAGGTGAAGACTTTTGGCGAAGCTTGTCTGATGG
TCAGGAAGCCAGCTCTCGAGCTTCTGGGCTACCTGAAAAATACCAATTTTGCTCATCCAGCTGTGCGATA
TCTTCTTTATGGGGAGAAGGGGACAGGAAAGACCCTCAGTCTCTGCCATGCTGTTCATTTTTGTGCAAGA
CATGACTGGCTGATTCTGCATATCCCAGATGCTCATCTTTGGGTAAAAAACTGCCGGGAGCTTCTACAGT
CCACTCACAACAAACAGCGCTTTGATCAACCCTTAGAGGCCTCTACCTGGCTGAAGAATTTCAAAACTAC
CAATGAGCGCTTCCTGAGTCAGATAAAAGTTCAAGAGAAGTATGTTTGGAATAAGAGAGAAAGCACTGAG
AAAGGCAGTCCTCTGGGAGAAGTTGTTGAACAGGGCCTAACCCGAGTGAGGAATGCCACTGACGCTGTTG
GGGTCGTGCTGAAGGAGCTGAAGGCTCAGAGCGCCCTAGGGCTCTTTCACCTCCTGGTGGCTGTGGATGG
AGTCAATGCCCTCTGGGGAAGGACCACACTGAAAAAAGAAGATAGAACCTTGATTGCCCCAGAGGAACTC
TCCCTTGTCCACAATCTAAGGAAAATGGTGAAAAATGACTGGCATGGAGGTGCAATCGTGTTGAGCTTGA
GCCAAACCGGGTCTCTCTTTAAGTCCAGAACAGCCTATTTGCCGCATGAGCTGCTGGGAAAGGAAGGATT
TAATGCCCTGGAGCCTTTTCTTCCCATCCTCATTCCCAACTATAATCCAAAGGAGTTTGAAAGTTCCTTC
CAGTACTACTTAGAGAACAACTGGCTTCAACATGAGAAAGCTTCAACAGAAGAAGGGAGGAAGGAGCTGA
GGTTCCTGAGTAACTGCAACCCTGAGCAGCTGGAGCGGCTCTGTGCCTCGCTGTAA

Translation (391 aa):
MLTGITRLFSRVQKLDPRCFLHMSVQATQNSQVPAERPRTVSRTSDSDPAKHGEQHEGQHYSIPLQDLKT
VFPHGLPPRYMMQVKTFGEACLMVRKPALELLGYLKNTNFAHPAVRYLLYGEKGTGKTLSLCHAVHFCAR
HDWLILHIPDAHLWVKNCRELLQSTHNKQRFDQPLEASTWLKNFKTTNERFLSQIKVQEKYVWNKRESTE
KGSPLGEVVEQGLTRVRNATDAVGVVLKELKAQSALGLFHLLVAVDGVNALWGRTTLKKEDRTLIAPEEL
SLVHNLRKMVKNDWHGGAIVLSLSQTGSLFKSRTAYLPHELLGKEGFNALEPFLPILIPNYNPKEFESSF
QYYLENNWLQHEKASTEEGRKELRFLSNCNPEQLERLCASL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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