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Report for CCDS89689.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89689.1 Public Mus musculus 3 Aimp1 23 108 98 CCDS HistoryNCBI Gene:13722Re-query CCDS DB by CCDS ID:89689.1Re-query CCDS DB by GeneID:13722See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89689.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000198513.5 ENSMUSP00000142513.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000198513.5Link to Ensembl Protein Viewer:ENSMUSP00000142513.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000198513Re-query CCDS DB by Protein ID:ENSMUSP00000142513
Original member Current member NCBI NM_001368626.1 NP_001355555.1 Accepted alive Link to Nucleotide Sequence:NM_001368626.1Link to Protein Sequence:NP_001355555.1Re-query CCDS DB by Nucleotide ID:NM_001368626Re-query CCDS DB by Protein ID:NP_001355555Link to BLAST:NP_001355555.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001355555.1 310 P31230 310 100% 0 0

Chromosomal Locations for CCDS 89689.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 132660575 132660741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132667385 132667553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132671979 132672187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132673965 132674129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132674749 132674862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132677005 132677113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGGCAACGAATGATGCTGTTCTGAAGAGGCTGGAGCAGAAGGGTGCAGAGGCGGATCAGATCATCGAAT
ATCTCAAGCAGCAGGTTGCTCTTCTTAAGGAGAAAGCAATTTTGCAGGCAACAATGAGAGAAGAAAAGAA
ACTTCGAGTTGAAAATGCTAAACTGAAAAAAGAAATAGAAGAGCTAAAGCAAGAGCTGATTCTGGCAGAA
ATTCATAACGGAGTGGAGCAAGTGCGTGTTCGATTGAGTACTCCACTGCAGACGAACTGTACTGCTTCTG
AAAGTGTGGTGCAGTCTCCATCAGTAGCAACCACCGCCTCTCCTGCTACAAAAGAGCAGATCAAAGCGGG
AGAAGAAAAGAAGGTGAAAGAGAAGACTGAAAAGAAAGGAGAGAAAAAGGAGAAGCAGCAGTCGGCAGCA
GCAAGTACTGACTCCAAGCCTATCGACGCATCGCGTCTGGATCTTCGAATTGGTTGTATTGTTACTGCCA
AGAAGCACCCTGATGCAGATTCACTGTATGTGGAGGAAGTAGATGTGGGAGAAGCAGCCCCGCGCACGGT
CGTCAGCGGGCTGGTGAATCATGTTCCTCTAGAACAGATGCAAAATCGTATGGTGGTTTTACTCTGTAAT
CTGAAGCCTGCAAAGATGCGGGGAGTTCTGTCTCAAGCCATGGTGATGTGTGCCAGTTCACCAGAGAAAG
TGGAGATTCTGGCCCCTCCCAACGGGTCCGTTCCTGGGGACAGAATTACTTTTGATGCTTTTCCTGGAGA
GCCTGACAAGGAGCTAAACCCTAAGAAGAAGATCTGGGAGCAGATCCAGCCTGACCTGCACACCAATGCT
GAGTGTGTGGCCACATACAAAGGAGCTCCCTTTGAGGTGAAGGGGAAGGGAGTTTGCAGAGCCCAAACCA
TGGCCAATAGTGGAATTAAATAA

Translation (310 aa):
MATNDAVLKRLEQKGAEADQIIEYLKQQVALLKEKAILQATMREEKKLRVENAKLKKEIEELKQELILAE
IHNGVEQVRVRLSTPLQTNCTASESVVQSPSVATTASPATKEQIKAGEEKKVKEKTEKKGEKKEKQQSAA
ASTDSKPIDASRLDLRIGCIVTAKKHPDADSLYVEEVDVGEAAPRTVVSGLVNHVPLEQMQNRMVVLLCN
LKPAKMRGVLSQAMVMCASSPEKVEILAPPNGSVPGDRITFDAFPGEPDKELNPKKKIWEQIQPDLHTNA
ECVATYKGAPFEVKGKGVCRAQTMANSGIK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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