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Report for CCDS9010.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9010.1 Public Homo sapiens 12 GLIPR1L2 24 110 108 CCDS HistoryNCBI Gene:144321Re-query CCDS DB by CCDS ID:9010.1Re-query CCDS DB by GeneID:144321See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9010.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000320460.8 ENSP00000317385.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000320460.8Link to Ensembl Protein Viewer:ENSP00000317385.4Re-query CCDS DB by Nucleotide ID:ENST00000320460Re-query CCDS DB by Protein ID:ENSP00000317385
Original member Current member NCBI NM_152436.3 NP_689649.1 Accepted alive Link to Nucleotide Sequence:NM_152436.3Link to Protein Sequence:NP_689649.1Re-query CCDS DB by Nucleotide ID:NM_152436Re-query CCDS DB by Protein ID:NP_689649Link to BLAST:NP_689649.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689649.1 253 Q4G1C9-2 253 100% 0 0

Chromosomal Locations for CCDS 9010.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 75391117 75391350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 75410434 75410679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 75413598 75413701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 75422904 75423081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (762 nt):
ATGGAGGCCGCAAGGCCCTTCGCCCGGGAGTGGAGGGCCCAGTCCCTACCCCTGGCAGTAGGGGGCGTTT
TGAAGCTGCGGCTCTGTGAGCTGTGGCTACTGCTACTGGGTTCTAGTTTGAACGCCAGATTTTTGCCAGA
CGAGGAGGACGTAGACTTTATCAACGAGTACGTGAACCTCCACAATGAGCTGCGGGGCGACGTCATTCCC
CGAGGGTCTAACTTGCGCTTCATGACTTGGGATGTAGCTTTATCACGGACTGCTAGAGCATGGGGAAAAA
AATGTTTGTTTACGCATAATATTTATTTACAAGATGTACAAATGGTCCATCCTAAATTTTATGGTATTGG
TGAAAATATGTGGGTCGGCCCTGAAAATGAATTTACTGCAAGTATTGCTATCAGAAGTTGGCATGCAGAG
AAGAAAATGTACAATTTTGAAAATGGCAGTTGCTCTGGAGACTGTTCTAATTATATTCAGCTTGTTTGGG
ACCACTCTTACAAAGTTGGTTGTGCTGTTACTCCATGTTCAAAAATTGGACATATTATACATGCAGCAAT
TTTCATATGCAACTATGCGCCAGGAGGAACACTGACGAGAAGACCTTATGAACCAGGAATATTTTGTACT
CGATGTGGCAGACGTGACAAATGCACAGATTTTCTATGCAGTAAGATAAAGAAAATAAACATGAAAAAAA
TGCATAATGGATTGGACAAGAAAAATAAGCGATTGAACACTAGTTTTTTATGGTCATGTTAA

Translation (253 aa):
MEAARPFAREWRAQSLPLAVGGVLKLRLCELWLLLLGSSLNARFLPDEEDVDFINEYVNLHNELRGDVIP
RGSNLRFMTWDVALSRTARAWGKKCLFTHNIYLQDVQMVHPKFYGIGENMWVGPENEFTASIAIRSWHAE
KKMYNFENGSCSGDCSNYIQLVWDHSYKVGCAVTPCSKIGHIIHAAIFICNYAPGGTLTRRPYEPGIFCT
RCGRRDKCTDFLCSKIKKINMKKMHNGLDKKNKRLNTSFLWSC


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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