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Report for CCDS90193.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90193.1 Public Mus musculus 7 Map4k1 23 108 98 CCDS HistoryNCBI Gene:26411Re-query CCDS DB by CCDS ID:90193.1Re-query CCDS DB by GeneID:26411See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90193.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000208227.1 ENSMUSP00000146807.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000208227.1Link to Ensembl Protein Viewer:ENSMUSP00000146807.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000208227Re-query CCDS DB by Protein ID:ENSMUSP00000146807
Original member NCBI NM_001355054.1 NP_001341983.1 Updated not alive Link to Nucleotide Sequence:NM_001355054.1Link to Protein Sequence:NP_001341983.1Re-query CCDS DB by Nucleotide ID:NM_001355054Re-query CCDS DB by Protein ID:NP_001341983
Current member NCBI NM_001355054.2 NP_001341983.1 Accepted alive Link to Nucleotide Sequence:NM_001355054.2Link to Protein Sequence:NP_001341983.1Re-query CCDS DB by Nucleotide ID:NM_001355054Re-query CCDS DB by Protein ID:NP_001341983Link to BLAST:NP_001341983.1

Chromosomal Locations for CCDS 90193.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 28983254 28983272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28983390 28983480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28984083 28984147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28986648 28986703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28986792 28986839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28986988 28987030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28987115 28987187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28988074 28988205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28988594 28988656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28988755 28988836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28989336 28989449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28989674 28989752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28990988 28991046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28991148 28991191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28991281 28991325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28993190 28993232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28993968 28994130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28994205 28994287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28995465 28995488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28996089 28996173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28998452 28998528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28998613 28998673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28999773 28999881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28999964 29000022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29000191 29000294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29000935 29001109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29001607 29001669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29001749 29001838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29001920 29001990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29003097 29003129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2253 nt):
ATGGTGAAGATGGAGCCTGATGATGACGTCGCCACCCTTCAGAAGGAGATTCTCATGCTGAAAACTTGCC
GGCACGCCAACATCGTGGCTTACCATGGCAGTTACCTCTGGCTGCAGAAGCTGTGGATCTGCATGGAATT
CTGTGGAGCTGGTTCTCTCCAGGACATCTACCAAGTGACTGGCTCTCTGTCCGAGCTCCAGATCAGCTAT
GTGTGCCGGGAAGTGCTTCAGGGACTGGCCTACCTGCATTCAGAGAAGAAGATACATCGAGACATCAAGG
GAGCCAACATCCTCATCAACGACTGCGGGGAGGTTAAGCTGGCTGACTTTGGGATCTCAGCCCAGATTGG
GGCGACACTGGCCCGGCGCCTTTCTTTCATTGGGACACCGTACTGGATGGCTCCAGAGGTGGCAGCGGTG
GCCCTGAAGGGTGGATACAATGAGCTGTGCGACATCTGGTCTCTTGGCATCACAGCCATCGAGCTGGCTG
AGCTTCAGCCCCCTCTCTTTGATGTGCACCCTCTCAGGGTTCTCTTCCTCATGACCAAGAGCGGGTACCA
GCCTCCTCGGCTGAAGGAAAAGAGCAGATGGTCATCTTCCTTCCACAACTTTGTCAAAGTCACCCTCACT
AAGAACTCCAAGAAACGCCCCAGTGCCACCAAGATGCTCAGTCATCAGCTGGTGTCCCAGCCAGGGCTGA
ACAGAGGCCTGATCTTGGATCTTCTTGACAAAATGAAGAATCCTGGGAAGGGGCTGCCTGTTGATATTGA
AGATGAGGAGCCTGAGCCACCCCCTGCCATCCCTCGGCGGATCAGATCTACCTACCGGGCCAGCTCACTA
GGGATCCCAGATGCAGACTGCTGCCGGAGGCAAATGGAGTTCCAGAGGCCCAGATGCGTGGACTGCAGAC
CTCAGGCTGAAACTGTTCGCTTATATCCCCCTGCACACTTCGGGAGCACCAGTCCCAGGAGTCAGCTGTC
AGATTCTGATGACGACTATGATGATGTGGACATCCCTGCCCCTTCAGAGAACATACCTCCTCCACTGCCC
CCCAAGCCCAAGTTTCGGTCTCCATCAGATGATGGTTCTGGAGGAATTAGGGACGATGGGCAATTGAGCC
CAGGGGTTCTGGTTCGATGTGCAAGTGGGCCCCCTCCACGTACTCCCCGACCTGGACCTCCCCCAGCGAC
CTGCAGCCCTCACCTCACAGCTCGCTCAGATCCCTCATTGTGGAACCCAGCTGCTCCGGAGCCAGGCCAG
CCCCCACTCGTACCCCCAAGGAAGGAAAAGATGAGGGGAAAGATGGAGAACGAGAAGCGCAGAGAGAAAT
ATCCCCTTCTTGTGAAATTATTCAATGGCTGTCCCCTTCAGATCCACAGCACAGCTGCCTGGACACATCC
CTCTACAAAAGATCAGAACCTGCTCCTGGGGGCAGAGGAAGGCATTTTCATACTGAACCGGAATGATCAG
GAGGCCACGCTGGAAATGATCTTCCCTGGCCGCACAACCTGGCTCTATTGCATCAACAACCTCCTCATGT
CTCTCTCAGGGAAGACACCCTACCTGTATTCTCATAGCATCCTGGGCCTGCTTGAAAGGAAAGACGGCAG
AACGGGAAGCCCCATTGCTCACATTAGCCCTCACCGGTTACTGGCAAGAAAGAACATGGTCTCCAGTAAG
ATCCAGGACACCAAAGGCTGCCGGGCTTGCTGTGTGGCTGAGAGTGCTAGCTCTGGGGGCCCATTCTTAT
GTGGGGCATTGGAGACGTCTGTGGTTTTGCTCCAGTGGTACCAACCAATGAACAAATTCTTGCTTGTCCG
GCAGGTGCTGTTCCCGCTGCCCACGCCGCTGCCGGTGTTCACGCTGCTGACAACGCCGGGCTCCGAGCTG
CCAGCTGTGTGCATCGGCGTGAGCCCGGGGCAGGCGGCAAAGTCGGTGCTCTTCCACACCGTGCGCTTCG
GTGCGCTGTCCTGCTGGCTGGACGACTCCAGCACGGAGCACAAGGGACCAGTGCAGGTGATCCAAGTAAA
GGAAGACATGGTGATGGTGTTGATGGATGGCTCTCTAAAGCTAGTGACCCCAGAGGGGGCACCAGCTCCT
GGGCTCCGCACCCCTGAGATCCCCATGACAGAAGCGGTCGAGGCTGTGGCTATGGTTGAAGATCGACTCG
AGGCCTTCTGGAAGCATGGAGTTCAGGTGTGGGCTCCAGGCTTGAAACAGGCCGGTAGTGGTGGAGACAA
GGCCCACGGATGA

Translation (750 aa):
MVKMEPDDDVATLQKEILMLKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQDIYQVTGSLSELQISY
VCREVLQGLAYLHSEKKIHRDIKGANILINDCGEVKLADFGISAQIGATLARRLSFIGTPYWMAPEVAAV
ALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEKSRWSSSFHNFVKVTLT
KNSKKRPSATKMLSHQLVSQPGLNRGLILDLLDKMKNPGKGLPVDIEDEEPEPPPAIPRRIRSTYRASSL
GIPDADCCRRQMEFQRPRCVDCRPQAETVRLYPPAHFGSTSPRSQLSDSDDDYDDVDIPAPSENIPPPLP
PKPKFRSPSDDGSGGIRDDGQLSPGVLVRCASGPPPRTPRPGPPPATCSPHLTARSDPSLWNPAAPEPGQ
PPLVPPRKEKMRGKMENEKRREKYPLLVKLFNGCPLQIHSTAAWTHPSTKDQNLLLGAEEGIFILNRNDQ
EATLEMIFPGRTTWLYCINNLLMSLSGKTPYLYSHSILGLLERKDGRTGSPIAHISPHRLLARKNMVSSK
IQDTKGCRACCVAESASSGGPFLCGALETSVVLLQWYQPMNKFLLVRQVLFPLPTPLPVFTLLTTPGSEL
PAVCIGVSPGQAAKSVLFHTVRFGALSCWLDDSSTEHKGPVQVIQVKEDMVMVLMDGSLKLVTPEGAPAP
GLRTPEIPMTEAVEAVAMVEDRLEAFWKHGVQVWAPGLKQAGSGGDKAHG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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