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Report for CCDS90428.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90428.1 Public Mus musculus 8 Dnase2a 23 108 98 CCDS HistoryNCBI Gene:13423Re-query CCDS DB by CCDS ID:90428.1Re-query CCDS DB by GeneID:13423See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90428.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000109744.7 ENSMUSP00000105366.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109744.7Link to Ensembl Protein Viewer:ENSMUSP00000105366.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000109744Re-query CCDS DB by Protein ID:ENSMUSP00000105366
Original member Current member NCBI NM_001368296.1 NP_001355225.1 Accepted alive Link to Nucleotide Sequence:NM_001368296.1Link to Protein Sequence:NP_001355225.1Re-query CCDS DB by Nucleotide ID:NM_001368296Re-query CCDS DB by Protein ID:NP_001355225Link to BLAST:NP_001355225.1

Chromosomal Locations for CCDS 90428.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 84908843 84908874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84908985 84909162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84909257 84909335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84909526 84909690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84909772 84909969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84910686 84911032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (999 nt):
ATGGGGACTCCGGGCAGCCTGTGGATTGGTGAGTTCGTGGTATACAAGCTGCCGGCTCACAGCGGGTCTA
GGGATACTCCAAAGGGACTGACGTATAAATACATGGACCAGAACTCCGACGGTTGGCAAGACGGTGTAGG
GTACATCAACAGCTCGGAGGGAGCCGTGGGCCGCAGCTTGCAGCCATTGTACCGAAAGAACTCCAGCCAG
CTGGCCTTTCTACTCTACAACGACCAACCTCCTAAATCCAGCTCAGCTCGGGACTCTACCGGCCATGGGC
ATACGAAGGGTGTCCTGCTCCTGGACCAAGAAGGGGGCTTCTGGCTGGTCCACAGTGTGCCTCGCTTCCC
ACCCCCTGCGTCCTCTGGTGCATACACCTGGCCTCCTAATGCTCAAACCTTCGGCCAGACCCTACTCTGT
GTGTCCCTCCCGTTCACTCAGTTTGCAAGGATTGGCAAGCAGCTAACCTACACCTATCCCCTTGTCTATG
ACCACAAGCTGGAAGGCTTCTTCGCTCAGAAATTACCTGACCTAGAGACGGTGATCAAGAACCAACATGT
CCTCCATGAGCCCTGGAATAGCAGTGTAATACTCACTTCCCAAGCTGGGGCCACCTTCCAGAGCTTTGCC
AAATTTGGAAAATTTGGAGATGACCTGTACTCCGGATGGTTGGCAGAAGCCCTTGGCACCAACCTACAGG
TCCAGTTCTGGCAAAATTCTCCAGGCATCCTGCCCTCCAACTGCTCTGGAGCCTATCAGGTTCTGGATGT
GACACAGACAGGATTCCCTGGCCCATCTAGACTAACTTTCAGTGCCACAGAGGACCACTCCAAATGGTGT
GTGGCCCCTCAAGGGCCCTGGGCCTGTGTGGGTGACATGAATAGGAACAAAGCAGAGACACACCGAGGTG
GCGGCACAGTATGCACCCAACTGCCTTCCTTTTGGAAGGCCTTCCAGTCCCTGGTGAAAGACTGGAAACC
CTGTATAGAGGGGAGCTGA

Translation (332 aa):
MGTPGSLWIGEFVVYKLPAHSGSRDTPKGLTYKYMDQNSDGWQDGVGYINSSEGAVGRSLQPLYRKNSSQ
LAFLLYNDQPPKSSSARDSTGHGHTKGVLLLDQEGGFWLVHSVPRFPPPASSGAYTWPPNAQTFGQTLLC
VSLPFTQFARIGKQLTYTYPLVYDHKLEGFFAQKLPDLETVIKNQHVLHEPWNSSVILTSQAGATFQSFA
KFGKFGDDLYSGWLAEALGTNLQVQFWQNSPGILPSNCSGAYQVLDVTQTGFPGPSRLTFSATEDHSKWC
VAPQGPWACVGDMNRNKAETHRGGGTVCTQLPSFWKAFQSLVKDWKPCIEGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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