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Report for CCDS90530.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90530.1 Public Mus musculus 9 Ets1 23 108 98 CCDS HistoryNCBI Gene:23871Re-query CCDS DB by CCDS ID:90530.1Re-query CCDS DB by GeneID:23871See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90530.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000238819.1 ENSMUSP00000159086.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000238819.1Link to Ensembl Protein Viewer:ENSMUSP00000159086.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000238819Re-query CCDS DB by Protein ID:ENSMUSP00000159086
Current member NCBI NM_001372534.1 NP_001359463.1 Accepted alive Link to Nucleotide Sequence:NM_001372534.1Link to Protein Sequence:NP_001359463.1Re-query CCDS DB by Nucleotide ID:NM_001372534Re-query CCDS DB by Protein ID:NP_001359463Link to BLAST:NP_001359463.1

Chromosomal Locations for CCDS 90530.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 32649370 32649438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 32664575 32664719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 32728675 32728794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 32730055 32730255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 32732949 32733026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 32733940 32734188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 32738099 32738359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 32752799 32752917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 32754213 32754425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1455 nt):
ATGAGCTACTATGTGGATCCCACTGTGGGCAGCCCCTCCACTTTCTCTGCACCTCATCCTGCAGTGGCGA
GGCAGGGTCCTATTAACGCTTTTGAAGATCCTCGAATGACCTGCGGCTTCCAGTCCAATTATCATCAGCA
AAGACCTCTTTATCCACTCTGGGATGAGACAGCCACTCAGGAAGTTCCTACTGGCCTTGAACACTGCGGC
TCAGACATGGAATGTGCAGATGTCCCGCTGTTAACTCCGAGCAGCAAAGAAATGATGTCCCAAGCCTTGA
AAGCTACTTTCAGTGGTTTCACAAAAGAACAGCAGCGACTGGGAATCCCCAAAGACCCCCGGCAGTGGAC
AGAAACCCACGTCCGGGACTGGGTGATGTGGGCTGTGAATGAGTTCAGCCTGAAAGGTGTGGACTTCCAG
AAGTTCTGTATGAGTGGAGCAGCACTGTGTGCCCTGGGTAAAGAATGCTTCCTCGAGCTGGCTCCAGACT
TTGTTGGGGATATCCTGTGGGAGCATCTAGAGATCCTGCAGAAAGAGGATGTGAAACCATATCAGGTTAA
TGGAGCCAACCCTACCTACCCAGAATCCTGTTACACCTCGGATTACTTCATCAGCTACGGTATCGAGCAT
GCTCAGTGTGTTCCTCCCTCAGAGTTCTCAGAGCCCAGCTTCATCACAGAGTCCTATCAGACGCTGCATC
CTATCAGCTCGGAAGAACTCCTGTCCCTCAAGTATGAGAACGACTACCCTTCTGTCATTCTCCAGGACCC
TCTCCAGACAGACACCTTGCAGACAGACTACTTTGCCATCAAGCAAGAGGTGTTAACTCCAGACAACATG
TGCCTGGGGAGAGCCAGTCGTGGTAAACTCGGGGGCCAGGACTCTTTTGAGAGCGTAGAGAGCTACGATA
GTTGTGACCGCCTCACCCAGTCCTGGAGCAGCCAGTCATCCTTCAACAGCCTGCAGCGGGTCCCCTCCTA
TGACAGCTTCGACTACGAGGATTATCCCGCTGCCCTGCCCAACCACAAGCCCAAGGGCACCTTCAAGGAC
TATGTGCGTGACCGTGCTGACCTCAACAAGGACAAGCCTGTCATTCCTGCTGCTGCCCTGGCTGGCTACA
CAGGAAGTGGGCCGATCCAGCTGTGGCAGTTTCTTCTGGAATTACTCACTGATAAGTCTTGTCAGTCCTT
TATCAGCTGGACAGGAGATGGCTGGGAATTCAAGCTTTCTGACCCAGATGAGGTGGCCAGGAGATGGGGA
AAGAGGAAAAACAAACCTAAGATGAATTATGAGAAACTGAGCCGTGGCCTTCGCTACTATTATGACAAAA
ATATCATCCACAAGACGGCGGGCAAGCGCTACGTATACCGCTTTGTGTGCGACCTGCAGAGCCTGCTGGG
ATACACCCCTGAAGAGCTGCACGCCATGCTGGATGTAAAGCCGGATGCTGACTAG

Translation (484 aa):
MSYYVDPTVGSPSTFSAPHPAVARQGPINAFEDPRMTCGFQSNYHQQRPLYPLWDETATQEVPTGLEHCG
SDMECADVPLLTPSSKEMMSQALKATFSGFTKEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQ
KFCMSGAALCALGKECFLELAPDFVGDILWEHLEILQKEDVKPYQVNGANPTYPESCYTSDYFISYGIEH
AQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYPSVILQDPLQTDTLQTDYFAIKQEVLTPDNM
CLGRASRGKLGGQDSFESVESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDYEDYPAALPNHKPKGTFKD
YVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWG
KRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDAD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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