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Report for CCDS91145.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91145.1 Public Homo sapiens 1 PPFIA4 24 110 108 CCDS HistoryNCBI Gene:8497Re-query CCDS DB by CCDS ID:91145.1Re-query CCDS DB by GeneID:8497See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91145.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295706.9 ENSP00000295706.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000295706.9Link to Ensembl Protein Viewer:ENSP00000295706.5Re-query CCDS DB by Nucleotide ID:ENST00000295706Re-query CCDS DB by Protein ID:ENSP00000295706
Original member Current member NCBI NM_001304331.2 NP_001291260.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001304331.2Link to Protein Sequence:NP_001291260.1Re-query CCDS DB by Nucleotide ID:NM_001304331Re-query CCDS DB by Protein ID:NP_001291260Link to BLAST:NP_001291260.1

Chromosomal Locations for CCDS 91145.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 203039009 203039242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203043397 203043498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203043931 203044095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203044379 203044453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203044696 203044785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203045368 203045559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203045841 203045987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203046248 203046382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203048227 203048310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203048583 203048714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203048918 203048980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203049676 203049767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203051769 203051877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203053753 203053961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203055432 203055672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203056120 203056155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203056375 203056508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203056784 203056950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203059178 203059271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203059770 203059851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203060217 203060417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203060970 203061032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203061652 203061678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203063828 203064003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203067695 203067792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203068453 203068628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203071692 203071760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203075577 203075757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203076341 203076390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3624 nt):
ATGTGTGAGGTGATGCCCACAATCAATGAGGGGGACCGCCTGGGTCCCCCTCATGGCGCCGATGCTGACG
CCAACTTCGAGCAGCTGATGGTGAACATGCTGGACGAGCGGGAGAAGTTGCTGGAGTCTCTTCGGGAGAG
TCAGGAGACCTTGGCGGCCACACAGAGCCGGCTCCAGGATGCCATACACGAGCGGGACCAGCTCCAGCGC
CACCTTAACTCCGCCCTCCCCCAGGAATTTGCCACCTTAACCCGGGAGCTGAGCATGTGTCGGGAGCAGC
TTCTAGAGCGGGAGGAAGAGATATCAGAACTGAAAGCAGAACGGAATAACACACGGCTGCTTCTGGAACA
TCTGGAGTGCCTGGTGTCCCGCCATGAACGGTCACTGCGGATGACTGTGGTGAAGCGCCAGGCCCAGTCA
CCTTCGGGGGTCTCCAGTGAGGTGGAGGTGCTGAAGGCCCTCAAGTCACTGTTTGAGCACCACAAGGCCC
TGGATGAGAAGGTGCGAGAGCGGCTCCGGGCAGCGCTGGAGCGAGTCACCACCTTGGAGGAGCAGCTGGC
AGGTGCCCACCAGCAGGTGTCTGCCCTGCAGCAGGGGGCAGGGGTGCGGGATGGAGCGGCAGAAGAGGAG
GGGACTGTGGAGCTGGGGCCGAAACGCCTGTGGAAGGAGGATACGGGCCGGGTAGAGGAGCTGCAGGAGC
TCCTGGAGAAGCAGAACTTTGAGTTGAGCCAGGCCCGGGAGCGACTGGTCACCCTAACAACAACCGTGAC
TGAACTCGAGGAGGACCTGGGCACGGCCCGCCGGGACCTCATCAAGTCGGAGGAGCTGAGCAGCAAGCAT
CAGCGGGACCTCCGGGAGGCTCTGGCCCAGAAGGAGGACATGGAAGAGCGGATTACTACACTGGAGAAGC
GCTACCTGGCTGCTCAGCGTGAGGCAACATCCATCCATGACCTCAATGACAAGCTGGAGAATGAGCTGGC
CAACAAGGAGTCCCTGCACCGCCAGTGTGAGGAGAAGGCCCGACACCTGCAGGAGCTGCTGGAGGTGGCA
GAGCAGAAGCTGCAGCAGACGATGCGCAAGGCAGAGACGCTGCCAGAGGTGGAGGCTGAGCTGGCCCAGA
GAATTGCAGCCCTCACCAAGGCTGAAGAACGGCATGGCAACATTGAGGAGCACCTGCGGCAGCTGGAGGG
ACAGCTGGAGGAGAAGAACCAGGAGCTGGCACGGGTGCGCCAGCGGGAAAAGATGAATGAGGACCACAAC
AAGCGGCTGTCGGACACAGTGGACCGGCTGCTCAGCGAGTCCAACGAGCGTCTGCAGCTCCACCTGAAGG
AGCGCATGGCTGCCCTGGAGGAGAAGAACACGTTGATCCAGGAGTTGGAGAGCTCCCAGCGGCAGATTGA
GGAGCAGCACCACCACAAGGGCCGCCTGTCTGAAGAGATTGAGAAGCTGCGCCAAGAGGTGGACCAGCTG
AAGGGCCGAGGGGGGCCGTTTGTGGATGGCGTCCACTCCAGGTCGCACATGGGCAGTGCAGCAGACGTGC
GGTTCTCCCTGGGCACAACCACACACGCACCCCCAGGCGTGCATCGCCGCTACTCGGCATTGAGGGAAGA
GTCTGCCAAGGACTGGGAGACTTCTCCACTGCCTGGGATGCTGGCCCCGGCAGCTGGCCCTGCCTTTGAC
AGTGACCCTGAGATCTCCGACGTGGATGAGGATGAGCCAGGGGGTCTGGTGGGCTCTGCGGATGTTGTCT
CCCCCAGCGGCCACTCAGATGCCCAGACCCTGGCCATGATGCTGCAGGAGCAGCTGGATGCCATCAATGA
GGAAATCAGGATGATTCAGGAAGAGAAGGAGTCCACGGAGCTCCGCGCGGAGGAGATTGAGACGCGTGTA
ACCAGTGGCAGCATGGAAGCCCTAAACCTGAAGCAGCTGCGCAAGCGTGGTTCCATCCCCACCTCTCTGA
CGGCCCTGTCCCTGGCCAGCGCGTCCCCACCACTCAGCGGCCGCTCCACACCTAAGCTCACCTCCCGCAG
TGCTGCCCAGGACCTGGACCGAATGGGGGTCATGACCCTGCCCAGTGACTTAAGAAAGCATAGGAGGAAG
CTGCTGTCGCCAGTGTCTCGGGAAGAGAACCGAGAGGATAAAGCCACCATAAAATGTGAGACTTCTCCTC
CTTCCTCACCCAGGACGCTGCGGCTAGAGAAGCTTGGCCACCCAGCCCTGAGCCAGGAAGAAGGCAAGAG
TGCCTTGGAGGATCAGGGCAGCAACCCCAGCAGCAGCAACAGCAGCCAGGACTCCCTGCACAAGGGCGCC
AAGCGCAAGGGCATCAAGTCGTCCATTGGCCGCCTGTTTGGGAAGAAGGAGAAGGGCAGGCTGATCCAGC
TGAGTCGGGATGGAGCCACAGGCCATGTTCTGCTAACAGACTCCGAATTCAGTATGCAGGAGCCTATGGT
GCCTGCCAAGCTGGGGACCCAGGCAGAGAAGGACCGGCGGCTAAAGAAGAAACACCAGCTGCTTGAAGAT
GCCCGCAGGAAAGGAATGCCCTTTGCCCAGTGGGATGGTCCTACTGTGGTCTCCTGGTTGGAGCTCTGGG
TGGGGATGCCTGCCTGGTATGTGGCAGCCTGCCGGGCCAACGTCAAGAGTGGTGCCATCATGTCCGCTCT
GTCGGACACAGAGATCCAGCGGGAGATCGGCATCAGCAATGCCCTGCACCGGCTCAAGCTCCGCCTGGCC
ATTCAGGAGATGGTGTCATTGACCAGCCCCTCTGCCCCACCCACCTCCAGGACTTCTTCTGGGAATGTCT
GGGTCACCCATGAAGAGATGGAAACTCTGGAAACATCTACTAAAACAGACAGTGAGGAGGGCAGCTGGGC
TCAGACCCTGGCCTATGGGGACATGAACCATGAGTGGATTGGGAATGAATGGCTACCCAGCCTGGGGCTC
CCGCAGTACCGCAGCTACTTCATGGAGTGCCTGGTGGACGCCCGCATGCTGGACCACCTCACCAAGAAGG
ACCTGCGGGTCCACCTGAAGATGGTGGACAGCTTCCATCGAACCAGTCTTCAGTATGGCATCATGTGTCT
GAAGAGGCTGAATTATGACCGGAAGGAGCTGGAGAAGAGGCGAGAGGAGAGCCAGCATGAGATCAAGGAT
GTGTTAGTCTGGACCAACGACCAGGTGGTTCATTGGGTCCAGTCTATTGGGCTCCGGGACTACGCAGGAA
ACCTGCATGAGAGTGGTGTGCATGGAGCCTTGCTGGCCCTGGACGAGAACTTCGACCACAACACACTGGC
CCTGATCCTCCAGATCCCCACACAGAACACCCAGGCACGCCAAGTGATGGAAAGAGAGTTCAATAACCTG
TTGGCCTTGGGCACAGACCGGAAGCTGGATGACGGGGATGACAAGGTGTTTCGCCGCGCGCCCTCCTGGA
GGAAGCGCTTCCGGCCGCGGGAGCACCACGGTCGCGGCGGCATGCTCAGCGCTTCCGCGGAGACCCTCCC
GGCGGGCTTCCGTGTGTCCACCCTGGGGACCCTGCAGCCCCCACCGGCCCCGCCAAAGAAGATCATGCCT
GAAGCTCACTCCCACTATCTCTACGGACACATGCTCTCCGCCTTCCGGGACTAG

Translation (1207 aa):
MCEVMPTINEGDRLGPPHGADADANFEQLMVNMLDEREKLLESLRESQETLAATQSRLQDAIHERDQLQR
HLNSALPQEFATLTRELSMCREQLLEREEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQS
PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRAALERVTTLEEQLAGAHQQVSALQQGAGVRDGAAEEE
GTVELGPKRLWKEDTGRVEELQELLEKQNFELSQARERLVTLTTTVTELEEDLGTARRDLIKSEELSSKH
QRDLREALAQKEDMEERITTLEKRYLAAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLEVA
EQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGNIEEHLRQLEGQLEEKNQELARVRQREKMNEDHN
KRLSDTVDRLLSESNERLQLHLKERMAALEEKNTLIQELESSQRQIEEQHHHKGRLSEEIEKLRQEVDQL
KGRGGPFVDGVHSRSHMGSAADVRFSLGTTTHAPPGVHRRYSALREESAKDWETSPLPGMLAPAAGPAFD
SDPEISDVDEDEPGGLVGSADVVSPSGHSDAQTLAMMLQEQLDAINEEIRMIQEEKESTELRAEEIETRV
TSGSMEALNLKQLRKRGSIPTSLTALSLASASPPLSGRSTPKLTSRSAAQDLDRMGVMTLPSDLRKHRRK
LLSPVSREENREDKATIKCETSPPSSPRTLRLEKLGHPALSQEEGKSALEDQGSNPSSSNSSQDSLHKGA
KRKGIKSSIGRLFGKKEKGRLIQLSRDGATGHVLLTDSEFSMQEPMVPAKLGTQAEKDRRLKKKHQLLED
ARRKGMPFAQWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNALHRLKLRLA
IQEMVSLTSPSAPPTSRTSSGNVWVTHEEMETLETSTKTDSEEGSWAQTLAYGDMNHEWIGNEWLPSLGL
PQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELEKRREESQHEIKD
VLVWTNDQVVHWVQSIGLRDYAGNLHESGVHGALLALDENFDHNTLALILQIPTQNTQARQVMEREFNNL
LALGTDRKLDDGDDKVFRRAPSWRKRFRPREHHGRGGMLSASAETLPAGFRVSTLGTLQPPPAPPKKIMP
EAHSHYLYGHMLSAFRD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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