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Report for CCDS91155.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91155.1 Public Homo sapiens 1 IL20 24 110 108 CCDS HistoryNCBI Gene:50604Re-query CCDS DB by CCDS ID:91155.1Re-query CCDS DB by GeneID:50604See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 91155.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000391930.3 ENSP00000375796.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391930.3Link to Ensembl Protein Viewer:ENSP00000375796.2Re-query CCDS DB by Nucleotide ID:ENST00000391930Re-query CCDS DB by Protein ID:ENSP00000375796
Original member Current member NCBI NM_001385165.1 NP_001372094.1 Accepted alive Link to Nucleotide Sequence:NM_001385165.1Link to Protein Sequence:NP_001372094.1Re-query CCDS DB by Nucleotide ID:NM_001385165Re-query CCDS DB by Protein ID:NP_001372094Link to BLAST:NP_001372094.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001372094.1 151 Q9NYY1-2 151 100% 0 0

Chromosomal Locations for CCDS 91155.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 206865853 206866011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 206866299 206866364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 206866484 206866636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 206868487 206868564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (456 nt):
ATGAAAGCCTCTAGTCTTGCCTTCAGCCTTCTCTCTGCTGCGTTTTATCTCCTATGGACTCCTTCCACTG
GACTGAAGACACTCAATTTGGGAAGCTGTGTGATCGCCACAAACCTTCAGGAAATACGAAATGGATTTTC
TGAGATACGGGGCAGTGTGCAAGCCAAAGATGGAAACATTGACATCAGAATCTTAAGGAGGACTGAGTCT
TTGCAAGACACAAAGCCTGCGAATCGATGCTGCCTCCTGCGCCATTTGCTAAGACTCTATCTGGACAGGG
TATTTAAAAACTACCAGACCCCTGACCATTATACTCTCCGGAAGATCAGCAGCCTCGCCAATTCCTTTCT
TACCATCAAGAAGGACCTCCGGCTCTGTCTGGAACCTCAGGCAGCAGTTGTGAAGGCTTTGGGGGAACTA
GACATTCTTCTGCAATGGATGGAGGAGACAGAATAG

Translation (151 aa):
MKASSLAFSLLSAAFYLLWTPSTGLKTLNLGSCVIATNLQEIRNGFSEIRGSVQAKDGNIDIRILRRTES
LQDTKPANRCCLLRHLLRLYLDRVFKNYQTPDHYTLRKISSLANSFLTIKKDLRLCLEPQAAVVKALGEL
DILLQWMEETE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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