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Report for CCDS91212.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91212.1 Public Homo sapiens 10 USP6NL 24 110 108 CCDS HistoryNCBI Gene:9712Re-query CCDS DB by CCDS ID:91212.1Re-query CCDS DB by GeneID:9712See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91212.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000379237.6 ENSP00000368539.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000379237.6Link to Ensembl Protein Viewer:ENSP00000368539.2Re-query CCDS DB by Nucleotide ID:ENST00000379237Re-query CCDS DB by Protein ID:ENSP00000368539
Original member Current member NCBI NM_001391959.1 NP_001378888.1 Accepted alive Link to Nucleotide Sequence:NM_001391959.1Link to Protein Sequence:NP_001378888.1Re-query CCDS DB by Nucleotide ID:NM_001391959Re-query CCDS DB by Protein ID:NP_001378888Link to BLAST:NP_001378888.1

Chromosomal Locations for CCDS 91212.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 11462441 11463849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11481770 11481922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11484971 11485070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11485169 11485234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11485817 11485911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11489102 11489222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11490832 11490880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11493119 11493228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11501101 11501208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11509595 11509675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11518535 11518574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11525386 11525468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11527500 11527567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11573606 11573678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2556 nt):
ATGATTCAAGTCTTGCAGATTGTAAAGGAGCTGGTGACACCATCAAGGCAAAAAGCAGCCACAGTGAAGG
AAGATTCAGACCAGGATGTAGCACTCAAACTTGCCCAGGAGCGAGCTGAAATAGTTGCTAAATATGACAG
AGGACGAGAAGGTGCAGAGATTGAACCTTGGGAAGATGCTGATTACCTTGTTTACAAAGTCACAGATAGA
TTTGGCTTTTTACATGAGGAGGAGCTCCCAGATCATAATGTGGCTGTGGAACGGCAAAAGCACCTGGAAA
TTGAAAGAACTACCAAATGGCTGAAAATGCTGAAAGGATGGGAAAAATACAAGAACACTGAAAAGTTTCA
TAGGCGAATTTACAAAGGAATACCACTCCAGCTCAGAGGTGAAGTCTGGGCCCTCCTTCTTGAGATCCCT
AAAATGAAAGAAGAAACAAGGGACCTGTATAGTAAATTAAAACACAGAGCACGGGGCTGTTCACCTGACA
TCAGACAAATAGACCTGGATGTCAACCGCACATTTCGGGACCACATTATGTTTAGAGACAGATATGGTGT
TAAGCAACAATCCTTATTCCATGTGCTTGCTGCCTATTCTATTTATAACACGGAAGTCGGGTATTGTCAG
GGGATGAGCCAGATCACAGCTTTACTCCTCATGTATATGAACGAGGAAGATGCCTTCTGGGCCCTGGTCA
AACTCTTCTCAGGCCCTAAACATGCCATGCATGGCTTTTTTGTCCAAGGTTTTCCTAAACTCTTGAGGTT
TCAAGAACATCATGAAAAAATACTGAACAAATTTCTGTCCAAGCTTAAGCAACACTTGGATTCTCAAGAA
ATCTACACAAGTTTTTACACAATGAAATGGTTTTTTCAGTGTTTCCTTGATCGTACTCCCTTTACACTAA
ACCTCAGAATATGGGATATCTACATCTTTGAAGGAGAACGAGTTCTTACTGCTATGTCTTACACCATCTT
AAAATTACACAAAAAACATCTAATGAAATTGTCCATGGAAGAACTTGTAGAATTTTTTCAGGAGACCCTG
GCAAAGGATTTTTTCTTTGAAGATGATTTTGTGATAGAGCAACTTCAGATTTCTATGACAGAACTAAAGC
GGGCAAAGTTAGACCTTCCAGAACCTGGTAAAGAGGATGAATATCCAAAGAAGCCCTTGGGGCAGCTTCC
ACCTGAACTTCAGTCTTGGGGCGTCCATCACTTGAGCAACGGACAGAGGAGCGTGGGCCGGCCGAGCCCG
CTGGCCAGCGGCAGGAGGGAGAGCGGGGCGCCCCACAGGAGGCACGAGCACTCCCCGCACCCCCAGAGCA
GGACCGGGACGCCCGAGAGAGCACAGCCGCCAAGACGGAAATCGGTGGAGGAGGAGAGCAAAAAGCTTAA
AGATGAGGCAGATTTTCAAAGAAAACTCCCATCGGGTCCACAGGACAGTTCCAGGCAATATAATCACGCA
GCTGCCAACCAAAATAGCAACGCCACTTCAAATATCAGGAAGGAGTTTGTGCCCAAATGGAATAAACCGT
CAGACGTCTCAGCTACAGAGAGAACTGCCAAATACACCATGGAAGGCAAAGGTCGAGCAGCGCACCCCGC
GCTCGCAGTTACCGTCCCAGGTCCTGCCGAGGTGCGGGTGTCAAACGTGCGGCCAAAGATGAAGGCCCTG
GATGCTGAGGACGGGAAGCGGGGCTCCACTGCATCGCAGTACGACAACGTGCCAGGCCCGGAGCTGGACA
GCGGCGCTTCCGTGGAGGAGGCGCTGGAAAGGGCTTACTCCCAGAGCCCCCGGCATGCCCTTTACCCTCC
TAGCCCGAGAAAGCACGCTGAGCCAAGTTCTAGTCCATCAAAAGTATCCAACAAGTTTACTTTTAAAGTA
CAGCCTCCAAGTCATGCACGATATCCGTCCCAGCTAGATGGGGAAGCCCGAGGGCTAGCTCATCCCCCCT
CCTACAGCAATCCCCCCGTTTACCACGGAAACTCTCCCAAACACTTCCCTACTGCCAACAGCAGCTTTGC
TTCTCCACAGTTTAGCCCTGGGACTCAACTGAATCCTTCCAGGAGACCTCATGGTTCTACTCTTTCCGTC
AGTGCTTCTCCGGAGAAATCTTACAGCCGCCCAAGCCCCCTTGTACTGCCGTCTAGTCGAATAGAAGTCC
TCCCTGTTGACACTGGTGCTGGGGGATATTCGGGCAATTCAGGGTCACCAAAGAATGGAAAATTGATCAT
TCCACCAGTGGATTACTTGCCAGATAACAGAACATGGTCAGAAGTTAGTTATACATACAGACCTGAGACG
CAGGGACAATCATGGACCCGAGATGCTAGCCGTGGCAATTTACCAAAATACTCAGCCTTTCAACTCGCAC
CCTTTCAGGACCATGGCCTCCCTGCAGTTTCTGTAGATAGTCCCGTGAGATATAAAGCTTCACCGGCCGC
AGAAGATGCCAGTCCATCTGGATATCCATATTCAGGGCCCCCGCCTCCAGCCTACCACTACAGGAATCGG
GACGGGCTTTCCATCCAAGAGTCAGTGTTGCTGTGA

Translation (851 aa):
MIQVLQIVKELVTPSRQKAATVKEDSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDR
FGFLHEEELPDHNVAVERQKHLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIP
KMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYSIYNTEVGYCQ
GMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQE
IYTSFYTMKWFFQCFLDRTPFTLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETL
AKDFFFEDDFVIEQLQISMTELKRAKLDLPEPGKEDEYPKKPLGQLPPELQSWGVHHLSNGQRSVGRPSP
LASGRRESGAPHRRHEHSPHPQSRTGTPERAQPPRRKSVEEESKKLKDEADFQRKLPSGPQDSSRQYNHA
AANQNSNATSNIRKEFVPKWNKPSDVSATERTAKYTMEGKGRAAHPALAVTVPGPAEVRVSNVRPKMKAL
DAEDGKRGSTASQYDNVPGPELDSGASVEEALERAYSQSPRHALYPPSPRKHAEPSSSPSKVSNKFTFKV
QPPSHARYPSQLDGEARGLAHPPSYSNPPVYHGNSPKHFPTANSSFASPQFSPGTQLNPSRRPHGSTLSV
SASPEKSYSRPSPLVLPSSRIEVLPVDTGAGGYSGNSGSPKNGKLIIPPVDYLPDNRTWSEVSYTYRPET
QGQSWTRDASRGNLPKYSAFQLAPFQDHGLPAVSVDSPVRYKASPAAEDASPSGYPYSGPPPPAYHYRNR
DGLSIQESVLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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