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Report for CCDS91679.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91679.1 Public Homo sapiens 12 DENND5B 24 110 108 CCDS HistoryNCBI Gene:160518Re-query CCDS DB by CCDS ID:91679.1Re-query CCDS DB by GeneID:160518See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91679.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354285.8 ENSP00000346238.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000354285.8Link to Ensembl Protein Viewer:ENSP00000346238.4Re-query CCDS DB by Nucleotide ID:ENST00000354285Re-query CCDS DB by Protein ID:ENSP00000346238
Original member Current member NCBI NM_001366890.1 NP_001353819.1 Accepted alive Link to Nucleotide Sequence:NM_001366890.1Link to Protein Sequence:NP_001353819.1Re-query CCDS DB by Nucleotide ID:NM_001366890Re-query CCDS DB by Protein ID:NP_001353819Link to BLAST:NP_001353819.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001353819.1 738 Q6ZUT9-4 738 100% 0 0

Chromosomal Locations for CCDS 91679.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 31433110 31433248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31442775 31442925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31447538 31447769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31451940 31452476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31460194 31460381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31479589 31480255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31495810 31495919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31499606 31499671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31590706 31590832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2217 nt):
ATGAGCGGGAGCTGCGCGGCGCCCGGCCCGGGCTCGGGCTCCTCCCCGGCCGCCTGCCGCTTCGCGCACT
ACTTCGTGCTGTGCGGGATCGACGCGGACAGCGGGCTGGAGCCTGACGAGCTGGCGGTTTTGTACCAATG
GCTAGAAGCAGATCGTCATGGCAAGAGCCAAGGTGCTGCAAATACGACTTCAGGCGAAAATTTTGACCAG
AGTCCTTTGAGAAGAACATTCAAATCCAAAGTTCTCGCCCACTATCCTCAGAATATAGAATGGAACCCTT
TTGATCAAGATGCGGTGAACATGTTGTGCATGCCTAAAGGGCTATCTTTCAGGACACAAACGGACAATAA
AGACCCCCAGTTTCACTCATTTATAATTACCAGGGAAGATGGTTCTCGCACCTATGGTTTTGTTCTCACT
TTTTATGAAGAAGTTACAAGTAAGCAAATCTGCACAGCAATGCAGACACTTTACCAGATGCACAACGCTG
AGCATTACAGCAGTGTGTATGCTTCATCTTCCTGCAGTATGGACTCATTGGCAAGTAGTCTTGATGAAGG
AGATACAACTTCCCTTTTGAAACTCCAGCGATACAACTCCTATGATATTAGCAGAGACACCCTGTATGTT
TCAAAAAGTATATGCTTGATCACACCGTTACCATTCATGCAGGCCTGCAAGAAATTCCTTATCCAGCTTT
ACAAGGCTGTTACCTCACAGCAGCCACCACCCTTGCCACTTGAAAGCTATATCCACAATATTCTTTATGA
AGTACCCCTTCCACCTCCAGGGAGGTCACTGAAATTTTATGGTGTTTATGAACCTGTCATCTGCCAGAGG
CCTGGGCCCAGTGAACTCCCCCTCTCTGATTACCCCCTTCGGGAGGCATTTGAGCTCCTGGGATTAGAGA
ACCTGGTGCAGGTGTTTACCTGTGTTCTTTTAGAGATGCAAATCCTTCTCTACTCACAAGATTATCAACG
CCTGATGACTGTGGCAGAAGGCATCACCACACTTTTGTTCCCATTTCAATGGCAACATGTTTATGTGCCC
ATTCTACCTGCTTCTCTGCTACATTTTCTTGATGCTCCTGTCCCTTATCTGATGGGCCTTCAGTCAAAAG
AAGGAACTGACCGTTCTAAACTAGAACTTCCTCAAGAGGCTAATTTGTGTTTTGTGGACATTGACAACCA
TTTTATTGAGTTGCCTGAAGAATTTCCACAGTTCCCCAATAAAGTGGATTTTATCCAAGAACTCTCTGAG
GTTCTTGTTCAATTTGGGATCCCTCCTGAGGGCAGCCTACATTGCAGTGAGAGTACCAGCAAACTGAAGA
ATATGGTTCTGAAAGACTTGGTCAATGACAAAAAGAACGGCAATGTCTGTACTAATAACATCAGCATGTA
TGAGTTACTGAAGGGCAATGAAACCATAGCCCGCTTGCAGGCTCTGGCCAAGCGTACTGGTGTGGCTGTG
GAAAAAATGGACCTCTCTGCTTCTCTGGGTGAAAAAGACAAGGATTTAAAACTGCATTGTGAAGAGGCAG
AACTAAGGGACTACCAGCTCAATGTACAGCTCCGAGAGGTCTTTGCTAACCGTTTTACACAGATGTTTGC
AGATTACGAAGCATTTGTCATTCAGACTGCCCAGGACATGGAATCCTGGCTGACCAACCGGGAACAGATG
CAGAACTTTGACAAAGCTTCCTTTCTGTCTGACCAGCCTGAGCCTTACCTGCCATTTCTTTCACGCTTCA
TTGAAACACAGATGTTTGCCACCTTTATTGATAATAAAATTATGTCTCAGTGGGAAGAGAAAGATCCTTT
GCTTCGGGTCTTTGACACTCGGATTGATAAGATAAGGCTGTATAATGTAAGGGCACCCACCTTGCGGACA
TCTATATATCAGAAATGCAGCACTTTAAAAGAAGCAGCCCAATCAATTGAGCAGAGACTGATGAAAATGG
ATCACACTGCAATCCACCCACATCTACTTGATATGAAAATTGGTCAAGGCAAATATGAGCAGGGGTTCTT
TCCAAAGTTACAGTCCGATGTCTTGGCAACAGGACCAACCAGTAACAATCGCTGGGTAAGTCGGAGTGCC
ACTGCACAGCGCAGGAAAGAACGCCTTCGCCAGCATTCTGAGCATGTTGGGCTGGACAACGACTTGAGGG
AGGTATGTGGTCTACCTTCCTGGGGTGCCTCACAGCAAGCGCCATGA

Translation (738 aa):
MSGSCAAPGPGSGSSPAACRFAHYFVLCGIDADSGLEPDELAVLYQWLEADRHGKSQGAANTTSGENFDQ
SPLRRTFKSKVLAHYPQNIEWNPFDQDAVNMLCMPKGLSFRTQTDNKDPQFHSFIITREDGSRTYGFVLT
FYEEVTSKQICTAMQTLYQMHNAEHYSSVYASSSCSMDSLASSLDEGDTTSLLKLQRYNSYDISRDTLYV
SKSICLITPLPFMQACKKFLIQLYKAVTSQQPPPLPLESYIHNILYEVPLPPPGRSLKFYGVYEPVICQR
PGPSELPLSDYPLREAFELLGLENLVQVFTCVLLEMQILLYSQDYQRLMTVAEGITTLLFPFQWQHVYVP
ILPASLLHFLDAPVPYLMGLQSKEGTDRSKLELPQEANLCFVDIDNHFIELPEEFPQFPNKVDFIQELSE
VLVQFGIPPEGSLHCSESTSKLKNMVLKDLVNDKKNGNVCTNNISMYELLKGNETIARLQALAKRTGVAV
EKMDLSASLGEKDKDLKLHCEEAELRDYQLNVQLREVFANRFTQMFADYEAFVIQTAQDMESWLTNREQM
QNFDKASFLSDQPEPYLPFLSRFIETQMFATFIDNKIMSQWEEKDPLLRVFDTRIDKIRLYNVRAPTLRT
SIYQKCSTLKEAAQSIEQRLMKMDHTAIHPHLLDMKIGQGKYEQGFFPKLQSDVLATGPTSNNRWVSRSA
TAQRRKERLRQHSEHVGLDNDLREVCGLPSWGASQQAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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