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Report for CCDS91774.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91774.1 Public Homo sapiens 12 RIMBP2 24 110 108 CCDS HistoryNCBI Gene:23504Re-query CCDS DB by CCDS ID:91774.1Re-query CCDS DB by GeneID:23504See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91774.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000690669.1 ENSP00000510530.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000690669.1Link to Ensembl Protein Viewer:ENSP00000510530.1Re-query CCDS DB by Nucleotide ID:ENST00000690669Re-query CCDS DB by Protein ID:ENSP00000510530
Original member Current member NCBI NM_001351226.2 NP_001338155.1 Accepted alive Link to Nucleotide Sequence:NM_001351226.2Link to Protein Sequence:NP_001338155.1Re-query CCDS DB by Nucleotide ID:NM_001351226Re-query CCDS DB by Protein ID:NP_001338155Link to BLAST:NP_001338155.1
Original member Current member NCBI NM_001351227.2 NP_001338156.1 Accepted alive Link to Nucleotide Sequence:NM_001351227.2Link to Protein Sequence:NP_001338156.1Re-query CCDS DB by Nucleotide ID:NM_001351227Re-query CCDS DB by Protein ID:NP_001338156Link to BLAST:NP_001338156.1
Original member Current member NCBI NM_001351228.2 NP_001338157.1 Accepted alive Link to Nucleotide Sequence:NM_001351228.2Link to Protein Sequence:NP_001338157.1Re-query CCDS DB by Nucleotide ID:NM_001351228Re-query CCDS DB by Protein ID:NP_001338157Link to BLAST:NP_001338157.1
Original member Current member NCBI NM_001393618.1 NP_001380547.1 Accepted alive Link to Nucleotide Sequence:NM_001393618.1Link to Protein Sequence:NP_001380547.1Re-query CCDS DB by Nucleotide ID:NM_001393618Re-query CCDS DB by Protein ID:NP_001380547Link to BLAST:NP_001380547.1
Original member Current member NCBI NM_001393619.1 NP_001380548.1 Accepted alive Link to Nucleotide Sequence:NM_001393619.1Link to Protein Sequence:NP_001380548.1Re-query CCDS DB by Nucleotide ID:NM_001393619Re-query CCDS DB by Protein ID:NP_001380548Link to BLAST:NP_001380548.1

Chromosomal Locations for CCDS 91774.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 130397361 130397549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 130399679 130399813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 130406172 130406243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 130407726 130407829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 130412619 130412787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 130414125 130414306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 130422453 130422561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 130428179 130428337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 130434734 130434880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 130436842 130437291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 130438365 130438516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 130441848 130442660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 130445160 130445269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 130450200 130450276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 130451195 130451340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 130456496 130456700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 130470693 130470743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 130478912 130479013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3372 nt):
ATGCGAGAGGCGGCTGAACGGCGGCAGCAGCTGCAGTTGGAGCATGACCAGGCCCTGGCTGTTCTCAGTG
CCAAGCAGCAGGAAATTGACCTTCTGCAGAAGGCTCAGGTTGAGGCTAAGAAGGAGCATGAAGGCGCAGT
GCGGCTGCTAGAGTCCAAGGTTCGAGAGCTGGAAGAGAAATGCCGGACTCAAAGTGAGCAGTTCAACCTG
CTGTCCCGGGACCTGGAGAAGTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGGGTGGCAGCGCGGTGG
CCCCCCTGGACATCTCCACGGCCCCCAGCAAGCCTTTCCCACAGTTCATGAATGGCCTAGCCACCTCCCT
CGGCAAAGGTCAGGAGAGCGCTATTGGAGGCAGCTCTGCGATCGGTGAATATATCCGGCCCCTTCCGCAG
CCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGCGCAAGATGCA
GATCTGAGTCAGACATGGAGAATGAACGGAATTCCAATACCTCCAAGCAGAGATACTCGGGGAAGGTCCA
CCTCTGTGTTGCCCGCTATAGTTACAACCCCTTCGATGGACCGAACGAGAACCCCGAAGCTGAGCTGCCC
CTCACGGCGGGAAAATACCTCTACGTCTATGGAGACATGGATGAGGATGGGTTCTATGAAGGAGAGCTCC
TCGATGGCCAGAGGGGTCTGGTGCCCTCCAACTTCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGC
AAGCACGCTGGGGAACGAGCAGGATCAGAACTTCATCAACCATTCCGGCATCGGCCTGGAGGGAGAGCAC
ATCCTGGACCTCCACTCCCCAACCCACATAGATGCGGGCATCACCGACAACAGTGCCGGGACCCTGGACG
TGAACATCGACGACATCGGAGAAGACATCGTGCCTTACCCTAGAAAAATCACCCTCATCAAACAACTCGC
CAAAAGTGTTATTGTGGGCTGGGAGCCCCCGGCGGTGCCACCAGGATGGGGAACGGTGAGCAGCTACAAC
GTCCTGGTGGACAAGGAGACACGCATGAACCTCACGCTGGGGAGCAGAACTAAAGCCCTCATCGAGAAGC
TCAACATGGCAGCCTGCACCTACCGCATCTCCGTGCAGTGCGTCACCAGCAGGGGCAGCTCGGATGAGCT
GCAGTGCACGCTGCTGGTGGGCAAGGACGTGGTGGTGGCCCCCTCCCACCTGCGGGTGGACAACATCACG
CAGATCTCCGCCCAGCTCTCCTGGCTACCCACCAACAGCAACTACAGCCACGTCATCTTCCTCAACGAGG
AGGAGTTCGACATCGTCAAGGCCGCCAGGTACAAGTACCAGTTCTTCAATCTCAGGCCCAACATGGCCTA
TAAGGTGAAGGTTCTGGCCAAACCCCACCAGATGCCGTGGCAGCTCCCGCTGGAGCAAAGGGAGAAGAAG
GAGGCCTTTGTGGAGTTCTCCACGTTGCCTGCAGGACCCCCAGCACCCCCACAAGATGTTACCGTCCAGG
CTGGGGTGACCCCCGCCACCATCCGGGTCTCCTGGAGACCACCTGTGCTGACGCCCACCGGGCTGTCCAA
TGGCGCAAACGTTACCGGCTACGGCGTGTATGCCAAAGGGCAGAGGGTGGCTGAAGTCATCTTCCCCACG
GCAGACAGCACGGCCGTGGAGCTTGTGCGGCTGCGGAGCCTGGAGGCCAAGGGCGTGACCGTGCGGACCC
TCTCCGCCCAGGGCGAGTCCGTGGACTCTGCAGTTGCTGCCGTTCCCCCCGAGCTCCTGGTGCCTCCTAC
CCCCCACCCGAGACCTGCACCCCAATCAAAGCCATTAGCAAGTTCTGGAGTCCCCGAAACCAAAGACGAG
CACCTGGGTCCCCACGCCAGGATGGATGAGGCCTGGGAGCAGAGCCGTGCACCTGGCCCTGTGCATGGGC
ACATGCTGGAGCCGCCCGTGGGCCCCGGAAGGCGGTCGCCCTCACCCAGCCGCATCCTGCCACAGCCACA
GGGCACCCCGGTGTCCACCACCGTCGCCAAGGCCATGGCCCGGGAGGCCGCGCAGAGGGTGGCCGAGAGC
AGCAGGTTAGAGAAAAGGAGCGTCTTCCTAGAGAGAAGCAGCGCGGGGCAGTACGCCGCCTCAGACGAGG
AGGACGCCTATGACTCTCCAGACTTCAAGAGGAGGGGCGCCTCGGTGGACGACTTCCTGAAAGGCTCTGA
ACTTGGCAAGCAGCCGCACTGTTGCCATGGAGACGAGTACCACACAGAGAGCAGCCGGGGGTCTGACCTC
TCAGACATCATGGAGGAGGACGAGGAGGAGCTGTATTCTGAAATGCAGCTGGAAGATGGGGGAAGGAGGC
GGCCCAGCGGCACGTCCCACAATGCCCTCAAGATTTTAGGGAACCCAGCCTCTGCAGGACGGGTGGATCA
CATGGGCCGGAGGTTTCCCCGTGGCAGCGCTGGTCCTCAGAGGTCCCGGCCCGTGACAGTCCCATCCATC
GACGATTACGGGCGAGACCGCCTTTCTCCAGACTTCTATGAAGAGTCAGAAACTGACCCTGGTGCCGAAG
AGCTCCCGGCCCGGATCTTTGTGGCTCTCTTTGACTACGACCCGCTCACCATGTCCCCAAACCCAGATGC
TGCAGAGGAGGAGCTTCCCTTTAAAGAAGGCCAGATCATCAAGGTTTATGGTGATAAAGACGCTGATGGA
TTCTACCGTGGGGAAACCTGTGCCCGGCTTGGCCTTATTCCTTGTAACATGGTCTCTGAGATACAAGCAG
ATGATGAGGAGATGATGGATCAGCTTCTTAGACAGGGCTTTCTCCCTCTGAATACACCTGTGGAGAAAAT
AGAGAGAAGCAGGAGAAGTGGCAGGCGTCATTCGGTATCGACGCGGAGAATGGTGGCCCTGTATGACTAC
GACCCCAGAGAAAGCTCGCCCAACGTCGATGTCGAGGCCGAACTTACATTTTGCACAGGAGATATTATTA
CAGTTTTTGGTGAAATTGATGAAGATGGATTTTATTATGGGGAGCTGAATGGGCAGAAAGGCCTTGTGCC
CTCAAACTTCTTGGAAGAAGTGCCTGATGACGTAGAAGTCTATCTTTCTGATGCTCCATCCCACTACTCT
CAAGATACGCCAATGCGCTCAAAGGCAAAAAGGGTTCCTCCTGAGGGTTCAGGTACAGCAAGGAGAGCTC
CATCCCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCCTGGGAGAGG
CAGGGAAATGTCCTCGAAAAAGAAAAAGGGGCTGCTTTCCAAAGGCAAGAAACTGCTGAAAAAGCTGGGT
GCAGTGAAATGA

Translation (1123 aa):
MREAAERRQQLQLEHDQALAVLSAKQQEIDLLQKAQVEAKKEHEGAVRLLESKVRELEEKCRTQSEQFNL
LSRDLEKFRQHAGKIDLLGGSAVAPLDISTAPSKPFPQFMNGLATSLGKGQESAIGGSSAIGEYIRPLPQ
PGDRPEPLSAKPTFLSRSGSARCRSESDMENERNSNTSKQRYSGKVHLCVARYSYNPFDGPNENPEAELP
LTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDFVQDNESRLASTLGNEQDQNFINHSGIGLEGEH
ILDLHSPTHIDAGITDNSAGTLDVNIDDIGEDIVPYPRKITLIKQLAKSVIVGWEPPAVPPGWGTVSSYN
VLVDKETRMNLTLGSRTKALIEKLNMAACTYRISVQCVTSRGSSDELQCTLLVGKDVVVAPSHLRVDNIT
QISAQLSWLPTNSNYSHVIFLNEEEFDIVKAARYKYQFFNLRPNMAYKVKVLAKPHQMPWQLPLEQREKK
EAFVEFSTLPAGPPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQRVAEVIFPT
ADSTAVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPPELLVPPTPHPRPAPQSKPLASSGVPETKDE
HLGPHARMDEAWEQSRAPGPVHGHMLEPPVGPGRRSPSPSRILPQPQGTPVSTTVAKAMAREAAQRVAES
SRLEKRSVFLERSSAGQYAASDEEDAYDSPDFKRRGASVDDFLKGSELGKQPHCCHGDEYHTESSRGSDL
SDIMEEDEEELYSEMQLEDGGRRRPSGTSHNALKILGNPASAGRVDHMGRRFPRGSAGPQRSRPVTVPSI
DDYGRDRLSPDFYEESETDPGAEELPARIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADG
FYRGETCARLGLIPCNMVSEIQADDEEMMDQLLRQGFLPLNTPVEKIERSRRSGRRHSVSTRRMVALYDY
DPRESSPNVDVEAELTFCTGDIITVFGEIDEDGFYYGELNGQKGLVPSNFLEEVPDDVEVYLSDAPSHYS
QDTPMRSKAKRVPPEGSGTARRAPSPTVHLHSGSPTSSMGSGSPGRGREMSSKKKKGLLSKGKKLLKKLG
AVK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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