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Report for CCDS91774.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
91774.1 |
Public |
Homo sapiens |
12 |
RIMBP2 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:23504](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:91774.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:23504](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 12 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 91774.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000690669.1 |
ENSP00000510530.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000690669.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000510530.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000690669](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000510530](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001351226.2 |
NP_001338155.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001351226.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001338155.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001351226](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001338155](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001338155.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001351227.2 |
NP_001338156.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001351227.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001338156.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001351227](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001338156](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001338156.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001351228.2 |
NP_001338157.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001351228.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001338157.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001351228](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001338157](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001338157.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001393618.1 |
NP_001380547.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001393618.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001380547.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001393618](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001380547](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001380547.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001393619.1 |
NP_001380548.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001393619.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001380548.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001393619](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001380548](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001380548.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 91774.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3372 nt): ATGCGAGAGGCGGCTGAACGGCGGCAGCAGCTGCAGTTGGAGCATGACCAGGCCCTGGCTGTTCTCAGTG CCAAGCAGCAGGAAATTGACCTTCTGCAGAAGGCTCAGGTTGAGGCTAAGAAGGAGCATGAAGGCGCAGT GCGGCTGCTAGAGTCCAAGGTTCGAGAGCTGGAAGAGAAATGCCGGACTCAAAGTGAGCAGTTCAACCTG CTGTCCCGGGACCTGGAGAAGTTCCGGCAGCACGCTGGCAAGATTGACCTGCTGGGTGGCAGCGCGGTGG CCCCCCTGGACATCTCCACGGCCCCCAGCAAGCCTTTCCCACAGTTCATGAATGGCCTAGCCACCTCCCT CGGCAAAGGTCAGGAGAGCGCTATTGGAGGCAGCTCTGCGATCGGTGAATATATCCGGCCCCTTCCGCAG CCTGGTGACAGGCCGGAGCCTCTGTCCGCCAAGCCCACCTTCCTGTCGAGATCCGGTAGCGCAAGATGCA GATCTGAGTCAGACATGGAGAATGAACGGAATTCCAATACCTCCAAGCAGAGATACTCGGGGAAGGTCCA CCTCTGTGTTGCCCGCTATAGTTACAACCCCTTCGATGGACCGAACGAGAACCCCGAAGCTGAGCTGCCC CTCACGGCGGGAAAATACCTCTACGTCTATGGAGACATGGATGAGGATGGGTTCTATGAAGGAGAGCTCC TCGATGGCCAGAGGGGTCTGGTGCCCTCCAACTTCGTGGACTTTGTGCAGGACAACGAGTCGCGGTTGGC AAGCACGCTGGGGAACGAGCAGGATCAGAACTTCATCAACCATTCCGGCATCGGCCTGGAGGGAGAGCAC ATCCTGGACCTCCACTCCCCAACCCACATAGATGCGGGCATCACCGACAACAGTGCCGGGACCCTGGACG TGAACATCGACGACATCGGAGAAGACATCGTGCCTTACCCTAGAAAAATCACCCTCATCAAACAACTCGC CAAAAGTGTTATTGTGGGCTGGGAGCCCCCGGCGGTGCCACCAGGATGGGGAACGGTGAGCAGCTACAAC GTCCTGGTGGACAAGGAGACACGCATGAACCTCACGCTGGGGAGCAGAACTAAAGCCCTCATCGAGAAGC TCAACATGGCAGCCTGCACCTACCGCATCTCCGTGCAGTGCGTCACCAGCAGGGGCAGCTCGGATGAGCT GCAGTGCACGCTGCTGGTGGGCAAGGACGTGGTGGTGGCCCCCTCCCACCTGCGGGTGGACAACATCACG CAGATCTCCGCCCAGCTCTCCTGGCTACCCACCAACAGCAACTACAGCCACGTCATCTTCCTCAACGAGG AGGAGTTCGACATCGTCAAGGCCGCCAGGTACAAGTACCAGTTCTTCAATCTCAGGCCCAACATGGCCTA TAAGGTGAAGGTTCTGGCCAAACCCCACCAGATGCCGTGGCAGCTCCCGCTGGAGCAAAGGGAGAAGAAG GAGGCCTTTGTGGAGTTCTCCACGTTGCCTGCAGGACCCCCAGCACCCCCACAAGATGTTACCGTCCAGG CTGGGGTGACCCCCGCCACCATCCGGGTCTCCTGGAGACCACCTGTGCTGACGCCCACCGGGCTGTCCAA TGGCGCAAACGTTACCGGCTACGGCGTGTATGCCAAAGGGCAGAGGGTGGCTGAAGTCATCTTCCCCACG GCAGACAGCACGGCCGTGGAGCTTGTGCGGCTGCGGAGCCTGGAGGCCAAGGGCGTGACCGTGCGGACCC TCTCCGCCCAGGGCGAGTCCGTGGACTCTGCAGTTGCTGCCGTTCCCCCCGAGCTCCTGGTGCCTCCTAC CCCCCACCCGAGACCTGCACCCCAATCAAAGCCATTAGCAAGTTCTGGAGTCCCCGAAACCAAAGACGAG CACCTGGGTCCCCACGCCAGGATGGATGAGGCCTGGGAGCAGAGCCGTGCACCTGGCCCTGTGCATGGGC ACATGCTGGAGCCGCCCGTGGGCCCCGGAAGGCGGTCGCCCTCACCCAGCCGCATCCTGCCACAGCCACA GGGCACCCCGGTGTCCACCACCGTCGCCAAGGCCATGGCCCGGGAGGCCGCGCAGAGGGTGGCCGAGAGC AGCAGGTTAGAGAAAAGGAGCGTCTTCCTAGAGAGAAGCAGCGCGGGGCAGTACGCCGCCTCAGACGAGG AGGACGCCTATGACTCTCCAGACTTCAAGAGGAGGGGCGCCTCGGTGGACGACTTCCTGAAAGGCTCTGA ACTTGGCAAGCAGCCGCACTGTTGCCATGGAGACGAGTACCACACAGAGAGCAGCCGGGGGTCTGACCTC TCAGACATCATGGAGGAGGACGAGGAGGAGCTGTATTCTGAAATGCAGCTGGAAGATGGGGGAAGGAGGC GGCCCAGCGGCACGTCCCACAATGCCCTCAAGATTTTAGGGAACCCAGCCTCTGCAGGACGGGTGGATCA CATGGGCCGGAGGTTTCCCCGTGGCAGCGCTGGTCCTCAGAGGTCCCGGCCCGTGACAGTCCCATCCATC GACGATTACGGGCGAGACCGCCTTTCTCCAGACTTCTATGAAGAGTCAGAAACTGACCCTGGTGCCGAAG AGCTCCCGGCCCGGATCTTTGTGGCTCTCTTTGACTACGACCCGCTCACCATGTCCCCAAACCCAGATGC TGCAGAGGAGGAGCTTCCCTTTAAAGAAGGCCAGATCATCAAGGTTTATGGTGATAAAGACGCTGATGGA TTCTACCGTGGGGAAACCTGTGCCCGGCTTGGCCTTATTCCTTGTAACATGGTCTCTGAGATACAAGCAG ATGATGAGGAGATGATGGATCAGCTTCTTAGACAGGGCTTTCTCCCTCTGAATACACCTGTGGAGAAAAT AGAGAGAAGCAGGAGAAGTGGCAGGCGTCATTCGGTATCGACGCGGAGAATGGTGGCCCTGTATGACTAC GACCCCAGAGAAAGCTCGCCCAACGTCGATGTCGAGGCCGAACTTACATTTTGCACAGGAGATATTATTA CAGTTTTTGGTGAAATTGATGAAGATGGATTTTATTATGGGGAGCTGAATGGGCAGAAAGGCCTTGTGCC CTCAAACTTCTTGGAAGAAGTGCCTGATGACGTAGAAGTCTATCTTTCTGATGCTCCATCCCACTACTCT CAAGATACGCCAATGCGCTCAAAGGCAAAAAGGGTTCCTCCTGAGGGTTCAGGTACAGCAAGGAGAGCTC CATCCCCCACAGTCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCCTGGGAGAGG CAGGGAAATGTCCTCGAAAAAGAAAAAGGGGCTGCTTTCCAAAGGCAAGAAACTGCTGAAAAAGCTGGGT GCAGTGAAATGA
Translation (1123 aa): MREAAERRQQLQLEHDQALAVLSAKQQEIDLLQKAQVEAKKEHEGAVRLLESKVRELEEKCRTQSEQFNL LSRDLEKFRQHAGKIDLLGGSAVAPLDISTAPSKPFPQFMNGLATSLGKGQESAIGGSSAIGEYIRPLPQ PGDRPEPLSAKPTFLSRSGSARCRSESDMENERNSNTSKQRYSGKVHLCVARYSYNPFDGPNENPEAELP LTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDFVQDNESRLASTLGNEQDQNFINHSGIGLEGEH ILDLHSPTHIDAGITDNSAGTLDVNIDDIGEDIVPYPRKITLIKQLAKSVIVGWEPPAVPPGWGTVSSYN VLVDKETRMNLTLGSRTKALIEKLNMAACTYRISVQCVTSRGSSDELQCTLLVGKDVVVAPSHLRVDNIT QISAQLSWLPTNSNYSHVIFLNEEEFDIVKAARYKYQFFNLRPNMAYKVKVLAKPHQMPWQLPLEQREKK EAFVEFSTLPAGPPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQRVAEVIFPT ADSTAVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPPELLVPPTPHPRPAPQSKPLASSGVPETKDE HLGPHARMDEAWEQSRAPGPVHGHMLEPPVGPGRRSPSPSRILPQPQGTPVSTTVAKAMAREAAQRVAES SRLEKRSVFLERSSAGQYAASDEEDAYDSPDFKRRGASVDDFLKGSELGKQPHCCHGDEYHTESSRGSDL SDIMEEDEEELYSEMQLEDGGRRRPSGTSHNALKILGNPASAGRVDHMGRRFPRGSAGPQRSRPVTVPSI DDYGRDRLSPDFYEESETDPGAEELPARIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADG FYRGETCARLGLIPCNMVSEIQADDEEMMDQLLRQGFLPLNTPVEKIERSRRSGRRHSVSTRRMVALYDY DPRESSPNVDVEAELTFCTGDIITVFGEIDEDGFYYGELNGQKGLVPSNFLEEVPDDVEVYLSDAPSHYS QDTPMRSKAKRVPPEGSGTARRAPSPTVHLHSGSPTSSMGSGSPGRGREMSSKKKKGLLSKGKKLLKKLG AVK
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