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Report for CCDS92233.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92233.1 Public Homo sapiens 17 ZNF232 24 110 108 CCDS HistoryNCBI Gene:7775Re-query CCDS DB by CCDS ID:92233.1Re-query CCDS DB by GeneID:7775See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92233.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000696535.1 ENSP00000512696.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000696535.1Link to Ensembl Protein Viewer:ENSP00000512696.1Re-query CCDS DB by Nucleotide ID:ENST00000696535Re-query CCDS DB by Protein ID:ENSP00000512696
Original member Current member NCBI NM_001320955.1 NP_001307884.1 Accepted alive Link to Nucleotide Sequence:NM_001320955.1Link to Protein Sequence:NP_001307884.1Re-query CCDS DB by Nucleotide ID:NM_001320955Re-query CCDS DB by Protein ID:NP_001307884Link to BLAST:NP_001307884.1

Chromosomal Locations for CCDS 92233.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 5105824 5106533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5108926 5109052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5109478 5109868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5111800 5111822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1251 nt):
ATGGAACCTCCTGGTCCTGTGAGGGGGCCCTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAG
TGCAGACTAGGATGGCTGTATCACTAACAGCAGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACAAGA
GAAGATGATGATGATGGGACCAAAGGAAGAGGAACAGTCTTGTGAGTATGAGACCAGGCTACCTGGGAAC
CACTCTACCAGTCAAGAGATCTTCCGCCAACGCTTCAGGCATCTCCGCTACCAGGAGACTCCTGGTCCCC
GGGAGGCCTTGAGCCAACTACGAGTACTCTGCTGTGAGTGGCTGAGGCCAGAGAAACACACGAAGGAGCA
GATCCTGGAGTTCCTGGTGCTGGAACAATTCTTGACCATCCTGCCTGAGGAGCTCCAATCCTGGGTCCCA
GGCCCTGCACATGGACCTGCACAGGAAGAGCCATGGGAGAAGAAGGAATCTCTGGGAGCAGCCCAGGAAG
CACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAACAGGTATATTTACATTT
TCTGTCAGTTGTTACAGAAGATGGCCCAGAGCCCAAGGACAAAGGATCATTGCCACAACCACCCATTACT
GAAGTGGAATCACAGGTGTTCTCAGAAAAACTTGCTACTGACACCTCTACATTTGAAGCTACCTCTGAGG
GTACCTTAGAACTGCAGCAGAGAAATCCCAAAGCGGAGAGACTGAGGTGGTCCCCTGCCCAGGAGGAAAG
TTTCAGGCAGATGGTTGTCATCCATAAGGAAATTCCCACAGGGAAGAAAGACCATGAATGTAGTGAATGT
GGTAAAACCTTCATTTATAACTCACATCTTGTTGTCCACCAGAGAGTTCATTCTGGAGAGAAACCCTATA
AGTGTAGTGACTGTGGGAAAACTTTCAAACAGAGCTCAAACCTCGGTCAGCATCAGAGAATTCATACAGG
AGAGAAACCCTTCGAATGTAATGAATGTGGGAAGGCCTTCAGATGGGGTGCTCATCTTGTTCAGCATCAG
AGGATTCACTCAGGAGAGAAGCCCTATGAGTGTAATGAGTGTGGGAAGGCCTTTAGTCAAAGCTCATATC
TAAGTCAGCATCGGAGAATTCACAGTGGAGAGAAACCTTTTATATGTAAAGAATGTGGGAAAGCTTATGG
ATGGTGCTCAGAGCTCATTAGACATCGGAGAGTTCATGCCAGAAAAGAGCCTTCCCATTGA

Translation (416 aa):
MEPPGPVRGPLQDSSWYEPSAELVQTRMAVSLTAAETLALQGTQGQEKMMMMGPKEEEQSCEYETRLPGN
HSTSQEIFRQRFRHLRYQETPGPREALSQLRVLCCEWLRPEKHTKEQILEFLVLEQFLTILPEELQSWVP
GPAHGPAQEEPWEKKESLGAAQEALSIQLQPKETQPFPKSEQVYLHFLSVVTEDGPEPKDKGSLPQPPIT
EVESQVFSEKLATDTSTFEATSEGTLELQQRNPKAERLRWSPAQEESFRQMVVIHKEIPTGKKDHECSEC
GKTFIYNSHLVVHQRVHSGEKPYKCSDCGKTFKQSSNLGQHQRIHTGEKPFECNECGKAFRWGAHLVQHQ
RIHSGEKPYECNECGKAFSQSSYLSQHRRIHSGEKPFICKECGKAYGWCSELIRHRRVHARKEPSH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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