NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS92322.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92322.1 Public Homo sapiens 17 ATP6V0A1 24 110 108 CCDS HistoryNCBI Gene:535Re-query CCDS DB by CCDS ID:92322.1Re-query CCDS DB by GeneID:535See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92322.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000703893.1 ENSP00000515530.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703893.1Link to Ensembl Protein Viewer:ENSP00000515530.1Re-query CCDS DB by Nucleotide ID:ENST00000703893Re-query CCDS DB by Protein ID:ENSP00000515530
Original member Current member NCBI NM_001378536.1 NP_001365465.1 Accepted alive Link to Nucleotide Sequence:NM_001378536.1Link to Protein Sequence:NP_001365465.1Re-query CCDS DB by Nucleotide ID:NM_001378536Re-query CCDS DB by Protein ID:NP_001365465Link to BLAST:NP_001365465.1

Chromosomal Locations for CCDS 92322.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 42460895 42461011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42466429 42466507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42468010 42468107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42477639 42477742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42478463 42478589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42480667 42480749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42483038 42483131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42487155 42487367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42490487 42490637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42494334 42494473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42495034 42495188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42495626 42495716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42498924 42499042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42500707 42500923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42501197 42501304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42507520 42507627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42508572 42508589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42513861 42513978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42514289 42514460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42521027 42521120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2406 nt):
ATGGGGGAGCTTTTCCGGAGTGAAGAAATGACACTGGCCCAGCTTTTTCTACAGTCAGAGGCTGCTTATT
GT
TGTGTCAGTGAATTAGGAGAACTTGGAAAGGTTCAGTTTCGTGACTTAAATCCAGATGTGAATGTTTT
C
CAACGGAAATTTGTGAATGAAGTTAGAAGATGTGAAGAAATGGATCGAAAGCTTCGATTTGTTGAGAAA
GAG
ATAAGAAAAGCTAACATTCCGATTATGGACACCGGTGAAAACCCAGAGGTTCCCTTCCCCCGGGACA
TG
ATTGACTTAGAGGCTGAATTGCATCATCAGCAGATGGCGGATCCAGACTTGTTGGAAGAGTCCTCATC
C
CTCTTGGAGCCAAGTGAGATGGGAAGAGGCACTCCTTTAAGACTTGGCTTCGTGGCTGGTGTCATTAAC
CGG
GAGCGCATCCCTACTTTTGAGCGCATGCTTTGGCGGGTATGCCGGGGAAATGTGTTCCTGCGACAGG
CT
GAAATCGAGAACCCCCTGGAGGATCCTGTGACTGGCGACTACGTGCACAAGTCTGTGTTTATCATTTT
C
TTCCAAGGCGATCAGCTGAAAAACAGAGTCAAGAAAATCTGTGAAGGGTTCCGAGCCTCACTCTATCCC
TGT
CCTGAGACACCACAGGAGAGGAAGGAAATGGCTTCTGGAGTGAATACCAGGATTGATGATCTCCAAA
TG
GTTCTGAATCAAACGGAGGATCACCGCCAGAGGGTTCTGCAGGCAGCTGCTAAGAACATCCGTGTCTG
G
TTCATCAAAGTGCGGAAGATGAAGGCCATCTATCACACCCTGAACCTGTGCAACATAGATGTGACTCAG
AAA
TGCTTGATTGCAGAGGTCTGGTGCCCTGTCACCGACCTTGACTCCATCCAGTTTGCACTCAGAAGGG
GC
ACGGAACACAGTGGTTCCACTGTACCTTCCATTTTGAACAGGATGCAGACAAACCAGACTCCCCCAAC
C
TATAACAAAACCAACAAGTTTACCTATGGCTTTCAGAACATAGTAGATGCTTATGGAATTGGAACTTAC
CGA
GAGATAAATCCAGCTCCGTATACTATTATCACGTTCCCTTTTCTATTTGCTGTGATGTTTGGAGACT
TC
GGTCATGGCATTTTAATGACCCTTTTTGCTGTGTGGATGGTACTGAGGGAGAGCCGGATCCTTTCCCA
G
AAGAATGAGAATGAGATGTTTAGCACTGTGTTCAGTGGTCGATACATTATTTTATTGATGGGTGTGTTC
TCC
ATGTACACTGGCCTCATCTACAATGATTGCTTTTCCAAGTCTCTTAATATCTTTGGGTCATCCTGGA
GT
GTACGGCCGATGTTTACTTATAATTGGACTGAAGAGACGCTTCGGGGGAACCCTGTTCTACAGCTGAA
C
CCAGCCCTCCCTGGAGTGTTTGGTGGACCATACCCTTTTGGCATTGATCCAATTTGGAACATTGCTACC
AAT
AAACTGACGTTCTTGAACTCCTTTAAGATGAAGATGTCTGTTATCCTTGGTATCATCCATATGCTGT
TT
GGAGTCAGCCTGAGTCTGTTCAACCATATCTATTTCAAGAAGCCCCTGAATATCTACTTTGGATTTAT
T
CCTGAAATAATCTTCATGACCTCTTTGTTTGGCTATTTGGTTATCCTTATTTTTTACAAGTGGACGGCC
TAT
GATGCTCATACCTCTGAGAATGCACCAAGCCTTCTGATCCATTTCATAAACATGTTCCTCTTTTCCT
AC
CCAGAGTCTGGTTATTCAATGTTGTATTCTGGACAGAAAGGAATTCAGTGTTTCCTGGTAGTGGTTGC
A
CTACTGTGTGTACCTTGGATGCTGCTGTTTAAACCATTGGTCCTTCGCCGTCAGTATTTGAGGAGAAAG
CAT
TTGGGAACTCTCAACTTTGGTGGGATCAGGGTGGGCAACGGACCGACAGAGGAGGATGCTGAGATTA
TT
CAGCATGACCAGCTCTCCACCCACTCAGAGGACGCAGACGAGCCTTCCGAGGACGAAGTGTTTGACTT
T
GGGGACACCATGGTCCACCAGGCCATCCACACCATCGAGTACTGCCTGGGCTGCATCTCCAACACTGCC
TCC
TACTTGCGGCTCTGGGCCCTCAGCCTCGCTCATGCGCAGCTGTCTGAGGTGCTTTGGACCATGGTGA
TC
CACATCGGCCTGAGCGTGAAGAGCTTGGCGGGAGGTTTGGTGCTGTTCTTCTTCTTCACTGCCTTTGC
C
ACCCTGACCGTGGCCATCCTCCTGATCATGGAGGGCCTCTCGGCCTTTCTCCACGCACTGCGCTTACAC
TG
G
GTTGAGTTCCAGAATAAATTCTACAGCGGGACCGGTTTCAAGTTCTTACCCTTCTCCTTCGAGCATA
TT
CGGGAAGGGAAGTTTGAAGAGTGA


Translation (801 aa):
MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEEMDRKLRFVEK
E
IRKANIPIMDTGENPEVPFPRDMIDLE
AELHHQQMADPDLLEESSSLLEPSEMGRGTPLRLGFVAGVIN
R
ERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVT
GDYVHKSVFIIFFQGDQLKNRVKKICEGFRASLYP
C
PETPQERKEMASGVNTRIDDLQM
VLNQTEDHRQRVLQAAAKNIRVWFIKVRKMKAIYHTLNLCNIDVTQ
K
CLIAEVWCPVTDLDSIQFALRRGT
EHSGSTVPSILNRMQTNQTPPTYNKTNKFTYGFQNIVDAYGIGTY
R
EINP
APYTIITFPFLFAVMFGDFGHGILMTLFAVWMVLRESRILSQKNENEMFSTVFSGRYIILLMGVF
S
MYTGLIYNDCFSKSLNIFGSSWSVRPMFTYNW
TEETLRGNPVLQLNPALPGVFGGPYPFGIDPIWNIAT
N
KLTFLNSFKMKMSVILGIIHMLFGVSLSLFNH
IYFKKPLNIYFGFIPEIIFMTSLFGYLVILIFYKWTA
Y
DAHTSENAPSLLIHFINMFLFSYPESGYSMLYSGQ
KGIQCFLVVVALLCVPWMLLFKPLVLRRQYLRRK
H
L
GTLNFGGIRVGNGPTEEDAEIIQHDQLSTHSEDADEPSEDEVFDFGDTMVHQAIHTIEYCLGCISNTA
S
YLRLWALSLAHA
QLSEVLWTMVIHIGLSVKSLAGGLVLFFFFTAFATLTVAILLIMEGLSAFLHALRLH
W
VEFQNKFYSGTGFKFLPFSFEHIREGKFEE



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser